Gene SeSA_A3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3914 
Symbol 
ID6517606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3786161 
End bp3786970 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content37% 
IMG OID642748887 
Productlipopolysaccharide core biosynthesis protein 
Protein accessionYP_002116650 
Protein GI194736931 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.276717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0204062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGCG TTAATTTCAT AACTCACGCC GATGTTCTGC AACTTATTGC GAAAAGAACG 
GCTGAAGATT GTATTATTTT TCTTTCTGGT CCTACGTCCA GAAAGACGCC GCTGTCCTTG 
TTACGAATGA AAGATGTCAT TGCAGTCAAT GGTTCTGTTC AATATTTGCT AAACAATAAC 
GTCAAGCCAT TTTTGTACCT TCTGACGGAT GTTCGCTTCC TTCATCGCCG GCGCGAAGAT 
TTTTATAACT TTAGCCGTAA CAGTCAGTTT ACTATCGTCA ATCTTGATGT GTACGAACAG 
GCTTCAGTAG ATGATCAAAA ATATATTGAA GAAAACTGTT TAATTATTCG CTCCTTTTAT 
CGCCGAGAAA AAGGGGGCTT TTTAAAGAAA ATTAAATTTA ATATCCTCAA GCGGGTTCAT 
AAAGCATTAC TTATTTCAGT TCCTCTTTCG AAAAGAGGAC GACTGGCTGG ATTTTGCAAG 
GATATCAGCA TCGGCTATTG CTCTTGCCAT ACTATTGCTT ATACCGCTAT TCAGGTTGCC 
TATTCCCTTA AGTATGGTCG TATTATATGT TCTGGGCTTG ACTTAACAGG GAGTTGCCCA 
CGTTTCTATG ACGAATCTAC CAGCCCTATG CCATCTGAGC TTAGTAAAGA CCTGTTTAAA 
ATACTGCCAT TTTTTACTTT TATGAGAAAA AATGTGAGTG ATTTAAATAT CTTTAATTTA 
TCAGATGATA CTGCAATTCA TTACGATATT ATTCCATATA TTACAGCCTC GGAACTTGAG 
GATGAAATAT ATTACGATAA AATTGTCTAG
 
Protein sequence
MGSVNFITHA DVLQLIAKRT AEDCIIFLSG PTSRKTPLSL LRMKDVIAVN GSVQYLLNNN 
VKPFLYLLTD VRFLHRRRED FYNFSRNSQF TIVNLDVYEQ ASVDDQKYIE ENCLIIRSFY 
RREKGGFLKK IKFNILKRVH KALLISVPLS KRGRLAGFCK DISIGYCSCH TIAYTAIQVA 
YSLKYGRIIC SGLDLTGSCP RFYDESTSPM PSELSKDLFK ILPFFTFMRK NVSDLNIFNL 
SDDTAIHYDI IPYITASELE DEIYYDKIV