Gene SeSA_A3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3896 
Symbol 
ID6515680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3769018 
End bp3769491 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content57% 
IMG OID642748869 
Productputative tRNA/rRNA methyltransferase YibK 
Protein accessionYP_002116632 
Protein GI194734332 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.282741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAACA TCGTACTCTT CGAACCAGAA ATCCCGCCGA ATACCGGCAA CATCATTCGT 
CTTTGCGCCA ATACCGGCTT TCGTCTGCAC ATCATCGAAC CGATGGGGTT TACCTGGGAT
GATAAGCGCT TACGCCGCGC AGGGCTGGAC TATCACGAAT TCGCCGCGGT TCAGCGCCAT
CACGATTATG CCGCCTTTGT CGCCGCCGAA AACCCGCAGC GCCTGTTTGC GTTGACGACA
AAGGGCACGC CCGCCCATAG CGCCGTAAGC TATCAGGATG GCGATTATTT GATGTTTGGC
CCGGAAACGC GCGGCCTGCC CGCCAGCATT CTCGATGCGT TGCCTAAAGA GCAGAAGATT
CGCATTCCGA TGATGCCGGA TAGCCGTAGC ATGAACCTGT CGAATGCGGT GTCGGTAGTG
GTGTATGAAG CGTGGCGCCA GTTAGGATAC CCCGGCGCGG TATTGCGCAG TTGA
 
Protein sequence
MLNIVLFEPE IPPNTGNIIR LCANTGFRLH IIEPMGFTWD DKRLRRAGLD YHEFAAVQRH 
HDYAAFVAAE NPQRLFALTT KGTPAHSAVS YQDGDYLMFG PETRGLPASI LDALPKEQKI
RIPMMPDSRS MNLSNAVSVV VYEAWRQLGY PGAVLRS