| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3895 |
|---|
| Symbol | lldD |
|---|
| ID | 6516535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 3767763 |
|---|
| End bp | 3768953 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642748868 |
|---|
| Product | L-lactate dehydrogenase |
|---|
| Protein accession | YP_002116631 |
|---|
| Protein GI | 194734323 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.479872 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATTT CAGCAGCCAG CGATTATCGC GCCGCAGCTC AGCGCACGTT GCCTCCTTTC
CTCTTCCACT ACATCGACGG CGGCGCGTAT GCGGAATATA CCCTGCGCCG AAATGTGGAA
GACCTGTCGC AAGTCGCTCT GCGCCAGCGC GTGCTGAAAA ATATGTCCGA TTTAAGCCTG
GAAACGACCC TGTTTAACGA AACGTTGTCG ATGCCGGTGG CATTAGCGCC GGTAGGCCTG
TGCGGCATGT ACGCCCGTCG CGGCGAAGTA CAGGCCGCCG CCGCCGCAGA CGCAAAGGGC
ATTCCGTTCA CCCTTTCCAC CGTCTCCGTC TGTCCGATTG AAGAAGTCGC CCCCACGCTT
AAACGCCCCA TGTGGTTTCA GCTCTACGTA TTACGCGATC GTGGTTTTAT GCGCAACGCG
CTTGAACGAG CAAAAGCGGC GGGCTGCTCC ACGCTGGTCT TTACCGTGGA TATGCCGACG
CCGGGCGCGC GCTACCGTGA CGCCCACTCC GGGATGAGCG GCCCAAACGC GGCCATGCGC
CGTTACTGGC AGGCGGTGAT GCACCCTAAA TGGGCGTGGG ATGTCGGCCT GAACGGTCGC
CCGCATGATT TAGGCAATAT TTCCGCCTAT CTGGGTAAAC CGACCGGCCT TGAGGACTAT
ATCGGCTGGC TGGCAAATAA CTTCGATCCG TCCATCTCCT GGAAGGATCT GGAGTGGATA
CGCGAATTCT GGGACGGCCC AATGGTGATC AAAGGGATCC TCGATCCAGA AGATGCCCGC
GATGCGGTAC GTTTCGGCGC TGACGGTATT GTGGTGTCGA ATCACGGCGG CCGCCAGCTC
GATGGCGTGC TCTCTTCCGC CCGCGCCCTG CCCGCCATTG CCGATGCGGT GAAAGGTGAT
ATCGCCATTC TGGCGGATAG CGGGATTCGT AACGGGCTGG ATGTCGTGCG TATGATTGCG
TTGGGGGCCG ATACCGTACT GCTGGGTCGG GCCTATCTCT ACGCGCTGGC GACGGCAGGA
AAAGCGGGTG TCGCCAACCT GCTGGACCTG ATCGAGAAAG AGATGAAAGT CGCCATGACC
CTGACCGGCG CGAAATCCAT TAGTGAAATC AGTGGCGATT CACTGGTGCA GGAACTGGGG
AGAAGTTTGC CCGCCGCGCT GGCGCCAATG AGCAAAGGCG ATGCCGCCTG A
|
|---|
| Protein sequence | MIISAASDYR AAAQRTLPPF LFHYIDGGAY AEYTLRRNVE DLSQVALRQR VLKNMSDLSL
ETTLFNETLS MPVALAPVGL CGMYARRGEV QAAAAADAKG IPFTLSTVSV CPIEEVAPTL
KRPMWFQLYV LRDRGFMRNA LERAKAAGCS TLVFTVDMPT PGARYRDAHS GMSGPNAAMR
RYWQAVMHPK WAWDVGLNGR PHDLGNISAY LGKPTGLEDY IGWLANNFDP SISWKDLEWI
REFWDGPMVI KGILDPEDAR DAVRFGADGI VVSNHGGRQL DGVLSSARAL PAIADAVKGD
IAILADSGIR NGLDVVRMIA LGADTVLLGR AYLYALATAG KAGVANLLDL IEKEMKVAMT
LTGAKSISEI SGDSLVQELG RSLPAALAPM SKGDAA
|
|---|
| |