| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3892 |
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| Symbol | |
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| ID | 6518422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 3760699 |
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| End bp | 3765039 |
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| Gene Length | 4341 bp |
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| Protein Length | 1446 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642748865 |
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| Product | putative autotransporter |
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| Protein accession | YP_002116628 |
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| Protein GI | 194734122 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures |
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| COG ID | [COG5295] Autotransporter adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAA TATTTAAAGT CCTCTGGAAT GCCGCTACGG GAACATTTGT TGTCACCAGC
GAAACCGCAA AAAGCCGCGG CAAAAAAAGC GGCCGCAGAA AGCTGGCGGT TTCCGCACTC
ATCAGTCTTA GCAGTATTAT GGTCTCTGCG GATGTATTGG CCAATGCAGG TAAAGATACT
GGCAGCGGTG TTACTCCATC CGACTCCACT GCAGGAACAG GGTGGATTGC AATTGGTACC
GATGCCACAG CCAATACTTA CACCAACGTT GATGGCGCAA GCGCCGCAAT GGGTTATCAC
GCCTCCGCGA TGGGGAAATG GAGTACCGCC ATTGGTTCAT ACAGCCAGTC CACCGGCAAC
TCTTCGCTAG CGCTTGGCGT AAAATCCGTT TCAGCCGGTG ACCGGGCTAT TGCGATGGGG
GCCTCATCCT CAGCTGGCGG GAGTTATTCG ATGGCAATGG GCGTGTATGC CGATTCGAGC
GGCGCAAACT CGGTTGCATT AGGTTATAAA TCTGTCGCAA GCGGAGCAAC TTCCGCTGCA
TTAGGTTATC AAGCCACTGC GAGCGGCGAC GACAGCGCTG CATTTGGTAA TGGCGCACAA
GCGATAGGCA CCAACTCAGT TGCCCTTGGC GCGGGCTCTA CCGCTCTGGA AGACAATTCG
GTCGCCGTGG GTAACAGCAC CACTCAGCGA CAGATCACCT ACGTTGCTAA AGGCGACATC
AATGCCAACA GTACCGATGC CGTTACAGGT GCGCAAATTT ATTCTTTAAG TCAATCCGTC
GCCGATCGAC TAGGCGGAGG GGCTTCCGTT AATTCTGATG GTACAGTGAA TGCGCCCCTC
TACAAGGTGG GCACAGGCAT CTACAATAAC GTAGGCAGTG CGTTAAGCGC ACTTAACACT
TCTATCACGA ATACAGAGGC CTCTGTCGCA GGATTAGCCG AAGACGCGCT GTTGTGGGAT
GGCAACACAA GCGCATTCAG CGCTAACCAC AGCGGAAGCG ACAGCAAGAT TACCAATCTG
GCGGCAGGTA CCCTGGCCGC AGACAGCACT GATGCGGTTA ACGGCTCCCA GTTGTTTGAT
ACAAATGAGA AAGTGGATCA GAACACCGCT GATATCACTA CCAATACCGA CAGCATTAAC
CAGAACACAA CCGATATCGC CGCCAATACG GCCAGCATCA ATCAGAACAC CACTGATATC
GCCACCAACA CCACCAATAT CAACAGCCTG AGCAACTCCG TTACCACGCT CACCGACGAT
GCCCTGTTGT GGGATGGCAG CGCAAGCGCA TTCAGCGCCA ACCACAGCGG AAGCGACAGC
AAAATCACCA ATCTGGCGGC AGGTACCCTG GCCGCGGACA GCACCGACGC CGTTAACGGC
TCCCAGCTGT TTGCCACCAA TGAAAATGTG TCTCAGAACA CCACGGATAT CGCTGCCAAT
ACTGACAGCA TTAACCAGAA CACCACTGAT ATTGCCACCA ACACCACCAA TATCAACAGC
CTGAGCAACT CCGTTACCAC GCTCACCGAC GATGCCCTGT TGTGGGATGG CAGCGCAAGC
GCATTCAGCG CTAAGCACAA CGGAAGCGAC AGCAAGATCA CCAATCTGGC GGCAGGCACC
CTGGCCGCAG ACAGCACCGA CGCCGTTAAC GGCTCCCAGC TGTTTGCCAC CAACGAAAAT
GTGTCTCAGA ACACCACGGA TATCACTGCC AATACCGACA GCATTAACCA GAACACCACT
GATATCGCCA CCAACACCAC CAGTATCAAC AACCTGAGCA ACTCAGTTAC CACGCTCACT
GACGATGCCC TGTTGTGGGA TGCAGCCTCT GGCGCATTCA ACGCTAACCG CAACGGAAAC
GCCAGCAAAA TCATTAATGT CGCCGCCGGG GACCTTTCTG AAGACAGTAC AGACGCGGTG
AACGGCTCCC AGTTGTATGA AACCAACCAG AAGGTGGATC AAAACACCTC TGCTATCGCA
GATATTAATA CGTCCATCAC TAACCTTAGC TCTGACAACC TGAGCTGGAA TGAGACAACG
AGTTCGTTCT CTGCCAGCCA CGGAAGTAGT ACAACAAACA AAATCACCAA CGTTGCTGCC
GGAGAGCTGT CTGAAGAAAG TACCGACGCC GTTAACGGAT CGCAGCTGTT CGAAACCAAT
GAAAAAGTGG ATCAGAACAC GACCGATATC GCTGCCAATA CCACCAACAT CACTCAGAAC
AGCACCGCGA TTGAGAACCT GAATACTTCT GTCTCCGACA TTAATACGTC CATTACCGGC
CTCACTGATA ACGCTCTGTT ATGGGACGAA GACATCGGCG CTTTCAGCGC AAACCACGGT
GGAAGCATCA GTAAAATAAC CAATGTCGCC GCCGGGGCGC TTTCTGAGGA CAGTACAGAC
GCGGTAAACG GCTCACAGTT GTATGAAACC AACCAGAAGG TAGATCAAAA CACCTCTGCT
ATCGCGGATA TCAATACGTC CATCACCAAT CTTGGTACCG ATGCACTGAG CTGGGATGAC
GAAGAGGGTG CGTTCAGCGC CAGCCACGGT ACCAGCGGTA CCAATAAGAT AACCAATGTG
GCAGCAGGTG AAATCGCCAG TGACAGTACT GACGCTGTTA ATGGCTCTCA GCTTTATGAA
ACTAACATGC TGATTTCTCA GTATAATGAA TCTATTAGCC AACTAGCCGG CGATACCAGC
GAAACCTATA TCACGGAAAA TGGTACCGGC GTGAAATACA TCCGTACGAA TGATAACGGG
CTTGAAGGCC AGGATGCATA CGCAACGGGT AACGGCGCAA CGGCAGTGGG TTACAACGCC
GTCGCATCCG GTGCTTCGAG TCTGGCGCTT GGAGAGAACA GCAGCAGCAG CATTGAGGGC
AGTATCGCTT TGGGCAGTGG CTCCACCTCT AACCGCGCGA TTTCATCAGG TATACGAGCA
ACGAGCGTAA CAAGCGATGG CGTCGTCATT GGCTACAATA CAACAGACAG AGAGTTGCTG
GGCGCGTTGT CATTGGGGAC GGATGGAGTA AGCTATCGTC AAATTACCAA CGTTGCGGAC
GGCTCTGAAG CGCAAGATGC GGTAACAGTT CGTCAGTTAC AAAATGCCAT TGGTGCGGTC
GCCACTACAC CGACCAAGTA CTACCACGCA AACTCAACGG AAGAAGATTC ACTGGCTGTC
GGGACTGACT CACTGGCAAT GGGTGCGAAA ACCATCGTCA ATGCTGATGC AGGTATTGGT
ATTGGTCTGA ATACACTGGT GATGGCTGAT GCCATCAACG GTATTGCTAT CGGTTCTAAC
GCACGCGCCA ACCATGCAAA TAGTATTGCA ATGGGTAATG GTTCTCAGAC CACTCGCGGC
GCACAGACTG ACTACACCGC CTACAACATG GACACACCGC AGAACTCTGT CGGTGAGTTC
TCTGTCGGCA GTGAAGACGG TCAACGTCAG ATCACTAACG TCGCAGCGGG TTCGGCAGAC
ACCGATGCCG TAAACGTTAG TCAATTGAAA GTCACCGACA GCCGTGTTGC CGCAAATACC
GAAAGCATTA ATAACCTGAA CACGCAGGTG AGTAGTCTTG ATACTCGCGT CACCAATATT
GAAAACGGCA TTGGCGATAT CGTCACTACC GGTAGCACCA AGTACTTCAA GACCAACACT
GATGGCGTAG ATGCAAATGC CCAGGGTGCG GACAGCGTCG CGATTGGATC TGGCTCTATT
GCTGCCGCTG AAAACAGCGT AGCGTTGGGC ACAAATTCAG TCGCAGATGA AGCTAATACT
GTGTCTGTCG GCTCTTCTAC CCAACAACGC CGTATTACCA ACGTTGCCGC AGGGGTGAAC
AACACTGACG CGGTTAATGT GGCGCAACTT AAAGCTTCAG AAGCAGGCTC CGTGCGTTAT
GAAACCAATG CAGATGGTTC GGTTAACTAT AGCGTGCTCA ACCTGGGAGA CGGGAGTGGC
GGTACCACTC GGATCGGCAA TGTTTCAGCG GCGGTGAACG ATACGGATGC GGTTAACTAT
GCGCAATTGA AACGCAGCGT CGAAGAAGCA AACACCTATA CCGACCAGAA AATGGGTGAA
ATGAACAGCA AAATCAAAGG GGTAGAAAAC AAGATGAGCG GCGGTATCGC CTCAGCGATG
GCCATGGCCG GTCTGCCACA AGCCTACGCC CCAGGTGCCA ACATGACCTC GATTGCTGGC
GGTACATTTA ATGGTGAAAG TGCCGTCGCC ATTGGTATCT CCATGGTAAG TGAAAGCGGG
GGCTGGGTGT ATAAATTGCA AGGAACCAGT AACAGCCAGG GCGATTACTC TGCAGCTATT
GGCGCTGGCT TCCAGTGGTA A
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| Protein sequence | MNRIFKVLWN AATGTFVVTS ETAKSRGKKS GRRKLAVSAL ISLSSIMVSA DVLANAGKDT
GSGVTPSDST AGTGWIAIGT DATANTYTNV DGASAAMGYH ASAMGKWSTA IGSYSQSTGN
SSLALGVKSV SAGDRAIAMG ASSSAGGSYS MAMGVYADSS GANSVALGYK SVASGATSAA
LGYQATASGD DSAAFGNGAQ AIGTNSVALG AGSTALEDNS VAVGNSTTQR QITYVAKGDI
NANSTDAVTG AQIYSLSQSV ADRLGGGASV NSDGTVNAPL YKVGTGIYNN VGSALSALNT
SITNTEASVA GLAEDALLWD GNTSAFSANH SGSDSKITNL AAGTLAADST DAVNGSQLFD
TNEKVDQNTA DITTNTDSIN QNTTDIAANT ASINQNTTDI ATNTTNINSL SNSVTTLTDD
ALLWDGSASA FSANHSGSDS KITNLAAGTL AADSTDAVNG SQLFATNENV SQNTTDIAAN
TDSINQNTTD IATNTTNINS LSNSVTTLTD DALLWDGSAS AFSAKHNGSD SKITNLAAGT
LAADSTDAVN GSQLFATNEN VSQNTTDITA NTDSINQNTT DIATNTTSIN NLSNSVTTLT
DDALLWDAAS GAFNANRNGN ASKIINVAAG DLSEDSTDAV NGSQLYETNQ KVDQNTSAIA
DINTSITNLS SDNLSWNETT SSFSASHGSS TTNKITNVAA GELSEESTDA VNGSQLFETN
EKVDQNTTDI AANTTNITQN STAIENLNTS VSDINTSITG LTDNALLWDE DIGAFSANHG
GSISKITNVA AGALSEDSTD AVNGSQLYET NQKVDQNTSA IADINTSITN LGTDALSWDD
EEGAFSASHG TSGTNKITNV AAGEIASDST DAVNGSQLYE TNMLISQYNE SISQLAGDTS
ETYITENGTG VKYIRTNDNG LEGQDAYATG NGATAVGYNA VASGASSLAL GENSSSSIEG
SIALGSGSTS NRAISSGIRA TSVTSDGVVI GYNTTDRELL GALSLGTDGV SYRQITNVAD
GSEAQDAVTV RQLQNAIGAV ATTPTKYYHA NSTEEDSLAV GTDSLAMGAK TIVNADAGIG
IGLNTLVMAD AINGIAIGSN ARANHANSIA MGNGSQTTRG AQTDYTAYNM DTPQNSVGEF
SVGSEDGQRQ ITNVAAGSAD TDAVNVSQLK VTDSRVAANT ESINNLNTQV SSLDTRVTNI
ENGIGDIVTT GSTKYFKTNT DGVDANAQGA DSVAIGSGSI AAAENSVALG TNSVADEANT
VSVGSSTQQR RITNVAAGVN NTDAVNVAQL KASEAGSVRY ETNADGSVNY SVLNLGDGSG
GTTRIGNVSA AVNDTDAVNY AQLKRSVEEA NTYTDQKMGE MNSKIKGVEN KMSGGIASAM
AMAGLPQAYA PGANMTSIAG GTFNGESAVA IGISMVSESG GWVYKLQGTS NSQGDYSAAI
GAGFQW
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