Gene SeSA_A3885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3885 
Symbol 
ID6516084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3754741 
End bp3756657 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content55% 
IMG OID642748858 
Productpts system mannitol-specific eiicba component 
Protein accessionYP_002116621 
Protein GI194737376 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2213] Phosphotransferase system, mannitol-specific IIBC component
[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain 
TIGRFAM ID[TIGR00851] PTS system, mannitol-specific IIC component 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.816196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCCG ATATTAAGAT CAAAGTGCAA AGCTTTGGTC GATTCCTCAG CAATATGGTG 
ATGCCTAATA TCGGCGCGTT TATCGCGTGG GGTATTATCA CCGCATTATT TATTCCAACA
GGGTGGTTGC CTAACGAAAC GCTGGCGAAA CTGGTTGGTC CGATGATCAC CTACCTGCTG
CCGCTGCTCA TCGGTTATAC CGGCGGTCGT CTGGTTGGCG GCGAACGCGG CGGCGTAGTG
GGCGCTATCA CTACCATGGG CGTTATTGTC GGCGCGGATA TGCCGATGTT CCTCGGCTCG
ATGATCGCCG GTCCATTAGG CGGCTACTGC ATTAAGAAAT TCGACAGTTG GGTAGACGGT
AAGATCAAAT CCGGTTTTGA GATGTTGGTG AACAACTTCT CCGCTGGCAT CATCGGTATG
ATCCTCGCCA TCCTGGCGTT CCTCGGTATT GGTCCGGCGG TTGAAGTCCT GTCCAAAATT
CTGGCGGCGG GCGTTAACTT CATGGTGGCG CACGATATGC TGCCGCTGGC GTCCATTTTT
GTTGAACCGG CGAAAATCCT GTTCCTCAAT AACGCGATTA ACCACGGCAT CTTCTCACCG
CTGGGTATCC AGCAGTCCCA TGAGATGGGT AAATCCATCT TCTTCCTGAT TGAAGCTAAC
CCGGGTCCGG GGATGGGCGT CCTGCTGGCG TACATGTTCT TCGGTCGTGG CAGCGCTAAA
CAGTCTGCGG GCGGCGCGGC AATTATCCAC TTCCTGGGCG GTATCCATGA GATCTACTTC
CCGTACGTGC TGATGAACCC ACGCCTGATT CTGGCGGTGA TTCTCGGCGG TATGACCGGC
GTATTCACCC TGACCATCCT GAACGGCGGT CTGGTCTCTC CGGCATCTCC GGGTTCCATT
CTGGCGGTAC TGGCGATGAC GCCAAAAGGC GCTTACTTCG CTAACATCGC TGCCATCGTG
GCGGCAATGG CGGTGTCCTT CGTGGTGTCT GCAATTCTGC TGAAAACCAG CAAAGTGAAA
GAAGAAGATG ACATTGAAGC GGCCACCCGT CGTATGCAGG ACATGAAAGC GGAATCTAAA
GGCGCCTCTC CGCTGGCGGC TGGCGACGTG ACCAACGACC TGAGCCATGT GCGTAAAATC
ATCGTGGCTT GCGATGCCGG TATGGGTTCC AGCGCGATGG GCGCAGGGGT ACTGCGTAAG
AAAGTACAGG ATGCGGGCCT GAGCCAGATC TCCGTCACCA ACAGCGCCAT TAACAATCTG
CCGCCGGATG TGGATCTGGT CATTACTCAC CGTGACCTTA CCGAGCGCGC GATGCGTCAG
GTACCGCAGG CGCAGCATAT TTCGCTGACC AACTTCCTGG ATAGCGGCCT GTACACCAGC
CTGACCGAAC GTCTGGTTGC CGCACAGCGC CACAATACTA ATGAAGAGAA AGTACGCGAC
CATCTGAAAG ACAGCTTTGA GGAGGGTGAT AACAACCTGT TCAAGCTGGG CGCGGAGAAT
ATCTTCCTGG GCCGTAAAGC CGCTAACAAA GAAGAGGCGA TTCGCTTTGC CGGTGAACAA
CTGGTGAAAG GCGGCTATGT TGAGCCGGAA TACGTCGAGG CGATGCTGGA CCGCGAAAAG
CTGACGCCGA CTTACCTCGG TGAATCCATC GCAGTACCGC ACGGCACGGT AGAAGCGAAA
GACCGCGTGC TGAAAACCGG CGTGGTGTTC TGCCAGTATC CGGAAGGCGT ACGCTTCGGT
GAAGAAGAAG ACGATATTGC CCGTCTGGTC ATTGGTATCG CCGCACGTAA CAATGAGCAC
ATCCAGGTCA TCACTAGTCT GACCAACGCG CTGGATGATG AATCCGTGAT CGAACGTCTG
GCGCACACCA CCAGCGTGGA TGAAGTGCTG GAACTGCTGG CAGGTAAAAA AGCTTAA
 
Protein sequence
MSSDIKIKVQ SFGRFLSNMV MPNIGAFIAW GIITALFIPT GWLPNETLAK LVGPMITYLL 
PLLIGYTGGR LVGGERGGVV GAITTMGVIV GADMPMFLGS MIAGPLGGYC IKKFDSWVDG
KIKSGFEMLV NNFSAGIIGM ILAILAFLGI GPAVEVLSKI LAAGVNFMVA HDMLPLASIF
VEPAKILFLN NAINHGIFSP LGIQQSHEMG KSIFFLIEAN PGPGMGVLLA YMFFGRGSAK
QSAGGAAIIH FLGGIHEIYF PYVLMNPRLI LAVILGGMTG VFTLTILNGG LVSPASPGSI
LAVLAMTPKG AYFANIAAIV AAMAVSFVVS AILLKTSKVK EEDDIEAATR RMQDMKAESK
GASPLAAGDV TNDLSHVRKI IVACDAGMGS SAMGAGVLRK KVQDAGLSQI SVTNSAINNL
PPDVDLVITH RDLTERAMRQ VPQAQHISLT NFLDSGLYTS LTERLVAAQR HNTNEEKVRD
HLKDSFEEGD NNLFKLGAEN IFLGRKAANK EEAIRFAGEQ LVKGGYVEPE YVEAMLDREK
LTPTYLGESI AVPHGTVEAK DRVLKTGVVF CQYPEGVRFG EEEDDIARLV IGIAARNNEH
IQVITSLTNA LDDESVIERL AHTTSVDEVL ELLAGKKA