Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3875 |
Symbol | sgbE |
ID | 6518937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 3742159 |
End bp | 3742854 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642748848 |
Product | L-ribulose-5-phosphate 4-epimerase |
Protein accession | YP_002116611 |
Protein GI | 194738071 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGAGC AACTGAAAGC CGAGGTGCTG GCGGCAAACC TGGCCCTCCC GGCGCACGGG CTGGTCACCT TTACCTGGGG CAACGTCAGC GCGGTCGATG AGACGCGCAA ACTGATGGTC ATCAAGCCTT CCGGCGTTGA ATATGAGGTG ATGACCGCCG ACGATATGGT GGTGGTAGAG ATCGCCAGCG GTAAGGTCGT TGAAGGCCAT AAAAAACCGT CGTCCGATAC CGCGACCCAT CTGGCGCTCT ATCGCCGCTA TCCGCAGATC GGCGGGATCG TGCATACCCA TTCCCGCCAT GCGACGATCT GGTCGCAGGC CGGGCTCGAT CTGCCCGCCT GGGGCACCAC CCACGCCGAC TATTTCTATG GCGCGATCCC CTGTACCCGA CTGATGACCG TTGAGGAAAT TAACGGCGAG TACGAGTATC AGACCGGCGA GGTGATTATT AAAACCTTTG AAGAGCGCGG TCTGGATCCG GCGCAAATCC CGGCGGTATT GGTTCATTCA CACGGCCCGT TTGCCTGGGG TAAAAATGCC GCCGATGCCG TCCACAACGC CGTGGTGCTT GAGGAGTGCG CCTATATGGG GCTGTTCTCG CGCCAGCTGG CCCCGCAGCT ACCGGATATG CAATCTGAAC TGCTCGATAA ACACTATCTG CGTAAACATG GCGCGAATGC CTATTACGGG CAGTAA
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Protein sequence | MLEQLKAEVL AANLALPAHG LVTFTWGNVS AVDETRKLMV IKPSGVEYEV MTADDMVVVE IASGKVVEGH KKPSSDTATH LALYRRYPQI GGIVHTHSRH ATIWSQAGLD LPAWGTTHAD YFYGAIPCTR LMTVEEINGE YEYQTGEVII KTFEERGLDP AQIPAVLVHS HGPFAWGKNA ADAVHNAVVL EECAYMGLFS RQLAPQLPDM QSELLDKHYL RKHGANAYYG Q
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