Gene SeSA_A3875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3875 
SymbolsgbE 
ID6518937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3742159 
End bp3742854 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content58% 
IMG OID642748848 
ProductL-ribulose-5-phosphate 4-epimerase 
Protein accessionYP_002116611 
Protein GI194738071 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR00760] L-ribulose-5-phosphate 4-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGAGC AACTGAAAGC CGAGGTGCTG GCGGCAAACC TGGCCCTCCC GGCGCACGGG 
CTGGTCACCT TTACCTGGGG CAACGTCAGC GCGGTCGATG AGACGCGCAA ACTGATGGTC
ATCAAGCCTT CCGGCGTTGA ATATGAGGTG ATGACCGCCG ACGATATGGT GGTGGTAGAG
ATCGCCAGCG GTAAGGTCGT TGAAGGCCAT AAAAAACCGT CGTCCGATAC CGCGACCCAT
CTGGCGCTCT ATCGCCGCTA TCCGCAGATC GGCGGGATCG TGCATACCCA TTCCCGCCAT
GCGACGATCT GGTCGCAGGC CGGGCTCGAT CTGCCCGCCT GGGGCACCAC CCACGCCGAC
TATTTCTATG GCGCGATCCC CTGTACCCGA CTGATGACCG TTGAGGAAAT TAACGGCGAG
TACGAGTATC AGACCGGCGA GGTGATTATT AAAACCTTTG AAGAGCGCGG TCTGGATCCG
GCGCAAATCC CGGCGGTATT GGTTCATTCA CACGGCCCGT TTGCCTGGGG TAAAAATGCC
GCCGATGCCG TCCACAACGC CGTGGTGCTT GAGGAGTGCG CCTATATGGG GCTGTTCTCG
CGCCAGCTGG CCCCGCAGCT ACCGGATATG CAATCTGAAC TGCTCGATAA ACACTATCTG
CGTAAACATG GCGCGAATGC CTATTACGGG CAGTAA
 
Protein sequence
MLEQLKAEVL AANLALPAHG LVTFTWGNVS AVDETRKLMV IKPSGVEYEV MTADDMVVVE 
IASGKVVEGH KKPSSDTATH LALYRRYPQI GGIVHTHSRH ATIWSQAGLD LPAWGTTHAD
YFYGAIPCTR LMTVEEINGE YEYQTGEVII KTFEERGLDP AQIPAVLVHS HGPFAWGKNA
ADAVHNAVVL EECAYMGLFS RQLAPQLPDM QSELLDKHYL RKHGANAYYG Q