Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3874 |
Symbol | |
ID | 6519159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 3741305 |
End bp | 3742165 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642748847 |
Product | putative L-xylulose 5-phosphate 3-epimerase |
Protein accession | YP_002116610 |
Protein GI | 194737478 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3623] Putative L-xylulose-5-phosphate 3-epimerase |
TIGRFAM ID | [TIGR00542] hexulose-6-phosphate isomerase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAATC ATCCATTAGG TATTTACGAG AAAGCACTGG CGAAAGATCT CAGTTGGCCG GAGCGGTTGG TGCTGGCAAA AAGCTGCGGT TTTGATTTTG TTGAGATGTC GGTGGATGAA ACCGACGAAC GTCTTTCTCG CCTGGAGTGG ACGCCAGCCC AACGCGCATC GCTGGTGAAC GCGATGCTGG AAAGCGGCGT CGCCATCCCG TCGATGTGTC TCTCCGCCCA TCGTCGATTC CCTTTTGGCA GCCGCGACGA GGCGGTGCGC GAGCGGGCGC GTGAAATCAT GACCAAAGCC ATCCGTCTGG CGCGCGACCT GGGGATCCGC ACCATCCAGC TGGCGGGTTA CGACGTCTAT TACGAAGAAC ACGACGAAGG CACCCAGCAA CGTTTCGCCG AAGGGCTGGC GTGGGCGGTG GAACAGGCCG CAGCGGCGCA GGTGATGCTG GCGGTGGAGA TCATGGATAC CGCGTTTATG AACTCCATCA GCAAGTGGAA AAAGTGGGAC GAGATGCTTT CGTCACCGTG GTTCACCGTT TATCCAGACG TCGGCAACCT CAGCGCCTGG GGGAACGACG TGACCGCCGA GCTGAAGCTG GGGATTGACC GTATCGCCGC AATTCATCTG AAAGATACGC TGCCGGTGAC CGGCGATAGC CCCGGCCAGT TCCGCGACGT GCCGTTTGGC GAAGGATGCG TTGATTTTGT GGGCATTTTT AAAACGCTGC ATGAGCTGAA TTATCGCGGT TCATTTCTGA TTGAGATGTG GACAGAGAAA TCCAGTGAGC CGGTGCTGGA AATTATCCAG GCCCGCCGCT GGATTGAATC ACGGATGCAG GAAGGAGGTT TCACATGTTA G
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Protein sequence | MRNHPLGIYE KALAKDLSWP ERLVLAKSCG FDFVEMSVDE TDERLSRLEW TPAQRASLVN AMLESGVAIP SMCLSAHRRF PFGSRDEAVR ERAREIMTKA IRLARDLGIR TIQLAGYDVY YEEHDEGTQQ RFAEGLAWAV EQAAAAQVML AVEIMDTAFM NSISKWKKWD EMLSSPWFTV YPDVGNLSAW GNDVTAELKL GIDRIAAIHL KDTLPVTGDS PGQFRDVPFG EGCVDFVGIF KTLHELNYRG SFLIEMWTEK SSEPVLEIIQ ARRWIESRMQ EGGFTC
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