Gene SeSA_A3874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3874 
Symbol 
ID6519159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3741305 
End bp3742165 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content57% 
IMG OID642748847 
Productputative L-xylulose 5-phosphate 3-epimerase 
Protein accessionYP_002116610 
Protein GI194737478 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3623] Putative L-xylulose-5-phosphate 3-epimerase 
TIGRFAM ID[TIGR00542] hexulose-6-phosphate isomerase, putative 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATC ATCCATTAGG TATTTACGAG AAAGCACTGG CGAAAGATCT CAGTTGGCCG 
GAGCGGTTGG TGCTGGCAAA AAGCTGCGGT TTTGATTTTG TTGAGATGTC GGTGGATGAA
ACCGACGAAC GTCTTTCTCG CCTGGAGTGG ACGCCAGCCC AACGCGCATC GCTGGTGAAC
GCGATGCTGG AAAGCGGCGT CGCCATCCCG TCGATGTGTC TCTCCGCCCA TCGTCGATTC
CCTTTTGGCA GCCGCGACGA GGCGGTGCGC GAGCGGGCGC GTGAAATCAT GACCAAAGCC
ATCCGTCTGG CGCGCGACCT GGGGATCCGC ACCATCCAGC TGGCGGGTTA CGACGTCTAT
TACGAAGAAC ACGACGAAGG CACCCAGCAA CGTTTCGCCG AAGGGCTGGC GTGGGCGGTG
GAACAGGCCG CAGCGGCGCA GGTGATGCTG GCGGTGGAGA TCATGGATAC CGCGTTTATG
AACTCCATCA GCAAGTGGAA AAAGTGGGAC GAGATGCTTT CGTCACCGTG GTTCACCGTT
TATCCAGACG TCGGCAACCT CAGCGCCTGG GGGAACGACG TGACCGCCGA GCTGAAGCTG
GGGATTGACC GTATCGCCGC AATTCATCTG AAAGATACGC TGCCGGTGAC CGGCGATAGC
CCCGGCCAGT TCCGCGACGT GCCGTTTGGC GAAGGATGCG TTGATTTTGT GGGCATTTTT
AAAACGCTGC ATGAGCTGAA TTATCGCGGT TCATTTCTGA TTGAGATGTG GACAGAGAAA
TCCAGTGAGC CGGTGCTGGA AATTATCCAG GCCCGCCGCT GGATTGAATC ACGGATGCAG
GAAGGAGGTT TCACATGTTA G
 
Protein sequence
MRNHPLGIYE KALAKDLSWP ERLVLAKSCG FDFVEMSVDE TDERLSRLEW TPAQRASLVN 
AMLESGVAIP SMCLSAHRRF PFGSRDEAVR ERAREIMTKA IRLARDLGIR TIQLAGYDVY
YEEHDEGTQQ RFAEGLAWAV EQAAAAQVML AVEIMDTAFM NSISKWKKWD EMLSSPWFTV
YPDVGNLSAW GNDVTAELKL GIDRIAAIHL KDTLPVTGDS PGQFRDVPFG EGCVDFVGIF
KTLHELNYRG SFLIEMWTEK SSEPVLEIIQ ARRWIESRMQ EGGFTC