Gene SeSA_A3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3872 
Symbol 
ID6515696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3739157 
End bp3740653 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content60% 
IMG OID642748845 
ProductL-xylulose/3-keto-L-gulonate kinase 
Protein accessionYP_002116608 
Protein GI194734656 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATT ACTGGCTGGG GTTAGATTGT GGTGGGAGTT GGCTAAAAGC CGGGTTGTAC 
GATGGCGCAG GCCGGGAAGT AGCGGTGCAA CGCCTGCCGC TACACGCTTT AAGCCCGCAG 
CCAGGCTGGG TTGAACGCGA TATGACCGAA CTGTGGCAAC AGTGCGGCTC GGTCATCAAC 
AAACTGCTGA CGCACACGGG GGTGAGCGGC TCACAAATCC GCGGTCTGGG CATTTCCGCT 
CAGGGTAAGG GACTGTTTCT GTTAGATAAA AGCGATCGGC CATTAGGTAA AGCGATACTC 
TCTTCCGACC GTCGCGCCAT GGAAATTGTC CAGCGCTGGC AAAAAGAAGC GGTTCCGCAA 
AAACTCTACC CGCTGACCCG GCAAACCCTG TGGACCGGAC ATCCGGTCTC CCTTTTACGC 
TGGGTAAAAG AGAATGAGCC GCAGCGCTAC GCGCAGATAG GCAGCGTCAT GATGACGCAT 
GACTATCTGC GCTGGTGCTT AACCGGCGTG AAGGGCTGCG AAGAGAGCAA CATCTCCGAG 
TCCAACCTCT ACAACATGGC GACGGGCCAG TACGACTCAC GTCTGACCGA GTGGCTGGGC 
ATCAGTGAAA TCGATAGCGC GCTGCCCCCC GTGGTGGGTT CAGCCGAAAT ATGCGGGGAG 
ATCACCGCTC AGGCGGCCGC CATCACCGGT CTGGCGGCGG GTACCCCCGT CGTCGGCGGC 
CTGTTTGACG TGGTTTCCAC CGCCCTTTGC GCCGGTATTG AGGATGAATC AACGCTCAAT 
GCGGTGATGG GGACCTGGGC CGTCACCAGC GGCATCGCTC ACGGTCTGCG CGACCATGAG 
GCCCACCCTT ACGTCTATGG CCGCTACGTC AATGACGGGC AGTATATCGT TCACGAAGCC 
AGCCCGACCT CCTCCGGCAA CCTTGAATGG TTTACCGCCC AGTGGGGCGA CCTCTCTTTT 
GACGAGATCA ATCAGGCGGT CGCCAGCCTG CCGAAAGCCG GTAGCGACCT CTTTTTTCTG 
CCGTTTCTCT ACGGCAGCAA TGCCGGACTG GAGATGACCT GCGGTTTTTA CGGCATGCAG 
GCGCTGCACA CCCGCGCGCA CCTGCTGCAG GCGATTTATG AAGGCGTGGT CTTCAGCCAT 
ATGACCCACC TCAACCGCAT GCGTGAACGT TTTACCGACG TTTGCGCCCT GCGCGTTACC 
GGCGGACCGG CCCACTCCGA CGTCTGGATG CAGATGCTGG CGGACGTCAG CGGTTTACGC 
ATTGAACTGC CGCAGGTGGA GGAGACCGGC TGCTTCGGCG CGGCGCTGGC TGCCCGCGTC 
GGCACTGGCG TATATCGCGA TTTCCGCGAG GCCCAACGCG ACCTGCAGCA CCCGGTGCGC 
ACGCTGCTGC CGGACATGAC CGCACACGCC CTCTACCAGC GCAAATACCG CCAATACCAG 
GATTTGATTG AAGCACTACA GGGCTATCAC GCCCGTATTA AGGAGCACGC ATTATGA
 
Protein sequence
MSNYWLGLDC GGSWLKAGLY DGAGREVAVQ RLPLHALSPQ PGWVERDMTE LWQQCGSVIN 
KLLTHTGVSG SQIRGLGISA QGKGLFLLDK SDRPLGKAIL SSDRRAMEIV QRWQKEAVPQ 
KLYPLTRQTL WTGHPVSLLR WVKENEPQRY AQIGSVMMTH DYLRWCLTGV KGCEESNISE 
SNLYNMATGQ YDSRLTEWLG ISEIDSALPP VVGSAEICGE ITAQAAAITG LAAGTPVVGG 
LFDVVSTALC AGIEDESTLN AVMGTWAVTS GIAHGLRDHE AHPYVYGRYV NDGQYIVHEA 
SPTSSGNLEW FTAQWGDLSF DEINQAVASL PKAGSDLFFL PFLYGSNAGL EMTCGFYGMQ 
ALHTRAHLLQ AIYEGVVFSH MTHLNRMRER FTDVCALRVT GGPAHSDVWM QMLADVSGLR 
IELPQVEETG CFGAALAARV GTGVYRDFRE AQRDLQHPVR TLLPDMTAHA LYQRKYRQYQ 
DLIEALQGYH ARIKEHAL