Gene SeSA_A3865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3865 
Symbol 
ID6519591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3732803 
End bp3733603 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content53% 
IMG OID642748838 
ProductHTH-type transcriptional regulator 
Protein accessionYP_002116601 
Protein GI194737487 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA ACAACGATAA AGAGAAGCCT GCGGGGAGTC AGAGCCTGTT TCGTGGCCTG 
ATGTTGATAG AAATTTTGAG TAACTACCCG AACGGTTGCC CACTGGCGCA CCTGTCGGAG 
CTGGCGGGGT TGAACAAGAG CACCGTCCAT CGTTTGTTGC AGGGGCTTCA ATCCTGCGGA 
TACGTGACGC CAGCGCCGGC GGCCGGGAGC TACCGTCTGA CGACAAAGTT TATTGCCGTC 
GGCCAAAAAG CCCTGTCATC GCTGAATATC ATCCACGTTG CGGCACCGCA CCTTGAGGCG 
CTCAACCTGA CCACCGGCGA GACGGTGAAT TTTTCCAGCC GTGAAGATGA TCACGCTATC 
CTGATTTATA AGCTGGAACC GACCACCGGT ATGCTGCGCA CGCGTGCCTA CATTGGCCAG 
CATATGCCGC TGTACTGCTC GGCGATGGGG AAAATTTATA TGGCGTTTGG TCAGCCGGAT 
TATGTGGCGT CTTACTGGGA AAGCCATAAA GATCAGATCC AGCCGCTGAC TCGCAACACC 
ATTACCGATT TACCAGCAAT GTACGATGAG CTGGCGCAAA TTCGTGAAAC CAGCATGGCA 
ATGGATCGCG AAGAAAATGA ACTGGGCGTT TCCTGTATTG CTGTGCCTGT GTTTGATATT 
CACCATCGGG TGCCTTACGC CATTTCTATT TCACTGTCGA CGTCACGGCT AAAACAGATC 
GGCGATAAAA ATCTGCTCAA ACCGTTGCGT GAAACCGCAC AGGCTATCTC TAATGAGCTG 
GGATTTACCG TTCGCGAATA A
 
Protein sequence
MSQNNDKEKP AGSQSLFRGL MLIEILSNYP NGCPLAHLSE LAGLNKSTVH RLLQGLQSCG 
YVTPAPAAGS YRLTTKFIAV GQKALSSLNI IHVAAPHLEA LNLTTGETVN FSSREDDHAI 
LIYKLEPTTG MLRTRAYIGQ HMPLYCSAMG KIYMAFGQPD YVASYWESHK DQIQPLTRNT 
ITDLPAMYDE LAQIRETSMA MDREENELGV SCIAVPVFDI HHRVPYAISI SLSTSRLKQI 
GDKNLLKPLR ETAQAISNEL GFTVRE