Gene SeSA_A3862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3862 
SymbolmalS 
ID6518130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3728725 
End bp3730752 
Gene Length2028 bp 
Protein Length675 aa 
Translation table11 
GC content56% 
IMG OID642748835 
Productperiplasmic alpha-amylase precursor 
Protein accessionYP_002116598 
Protein GI194738155 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG CCGCCTTCGC TCTGACGCTG ATACCCGGTA TCGCGATCGC CTCATCATGG 
ACCTCGCCCG GTTTTCCGAC GTTCTCGACG CAGGAAACCG GACGCTTTAC CAGCCATGCT
GCATTAACAA AAGGTACACG CGCGTTAACG CTCCATATTG ACCAGCAGTG CTGGCAGCCC
TCCGGCGCCA TAAAACTCAA CCAGATGTTG TCGTTAAAAC CCTGCGAAGG CGCGCCGCCG
CAATGGCGTT TGTTTAAAGA TGGCGACTAT ACAATAACGG TAGATACCCG CTCCGGTACG
CCGACCCTGT TGTTATCGAT AAAAACTGAA CCTGAACGCA CCACACAGCT CACCTACCAG
TGTCCCGTCT GGGATGGTTC GCCGCTCACG CTGGATGTTA GCCAGACCTT TCCGGAAGGG
ACGGTAGTGC GCGATTATTA CAGTGGTCAA ACCGATACCG TCCAAAACGG GCAAATCACG
CTGCAACCTG CCGACAGCCA CGGGCTTTTA TTGCTGGAAC GCGCGGAAAC CCATGCATCA
GCGCCTTTTA ACTGGCGCAA CGCCACCGTT TATTTTGTGC TTACGGATCG CTTTCGCAAT
GGCGATCCAA CCAACGACCA CAGCTATGGT CGCCATAAGG ATGGTATGCA AGAGATTGGC
ACTTTCCACG GCGGCGATTT GCGCGGGTTG ACGAGTCAAC TGGACTATCT ACAGCAATTA
GGCGTGAACG CCTTGTGGAT AAGCTCGCCG TTTGAACAGA TCCACGGCTG GGTCGGCGGC
GGGACAAAAG GCGATTTTCC TCATTACGCC TATCACGGCT ATTACACTCA GGACTGGACG
ACGCTGGATG CCAATATGGG CAGCGAAGCC GATCTCCGCG CGCTGGTCGA CGGCGCGCAC
CAGCGCGGCA TCCGTATTTT ATTTGACGTA GTAATGAATC ATGCCGGTTA CGCCACGCTG
GCGGATATGC AGGAGTATCA GTTCGGCGCG CTCTATTTAT CCGGCGCGGA ACGGCAAAAA
ATTCTCGGCG ATCGCTGGAC AAACTGGCGA CCCGCCGCCG GACAAAGCTG GCACAGCTTT
AACGACTACA TCAACTTCAG CGACAGCGCC GCCTGGGAAA AATGGTGGGG GAAAAAGTGG
ATTCGTACCG ATATTGGCGA CTACGACAGT CCGGGATTTG ACGATTTAAC CCTGTCGCTG
GCCTTTCTGC CGGATATAAA AACGGAATCT ACCACGCCTT CCGGCCTACC CGCGTTCTAT
GCCAACAAAC CCGATACTAA AGCAAAGTTC ATTGAAGGCT ATACGCCACG GGATTATCTG
ACTCACTGGT TAAGCCAGTG GGTGCATGAT TACGGCATTG ACGGGTTCCG GGTCGATACT
GCCAAAAATG TTGAGCTTCC TGCCTGGCAA CAGCTAAAAA CCCAGGCCAG CGCGGCATTA
CGCGAGTGGA AGCAGGCCAA TCCGGACAAA GCGCTGGATG ATAGCCCGTT CTGGATGACT
GGCGAAGCGT GGGGCCACGG CGTCATGAAA AGTGACTATT ATCGCTATGG TTTCGACGCG
ATGATCAATT TTGATTATCA GGAGCAGGCC GCGAAAGCGG TCGATTGCCT GGCGGAAATG
GGGCCAGTCT GGCAGCAGAT GGCGGATAAA ATGCAGGATT TCAACGTATT AAGTTACCTC
TCCTCGCATG ATACGCGCCT TTTCCGTGAG GGCGGTGATA AGGCGGCGGA ACTGCTGCTG
CTTTCGCCGG GCGCGGTGCA GATCTTTTAC GGCGATGAAT CCGCTCGTCC CTTCGGCCCC
ACCGGCTCCG ACCCCCTGCA AGGCACCCGT TCAGATATGA ACTGGCAGGA CGTGAGCGGA
AAGTCAGCCG CAGCCGTCGC GCACTGGCAG CGTATTAGCC AGTTCCGCGC CAGACATCCC
GCCATCGGCG CAGGCCAACA AACCACGCTG ACGCTAAAAC ACGGGTACGG TTTTGTACGC
CAGTACGGCG ACGATACGGT GATGGTCGTC TGGGCAGGCC GCCGCTAA
 
Protein sequence
MKLAAFALTL IPGIAIASSW TSPGFPTFST QETGRFTSHA ALTKGTRALT LHIDQQCWQP 
SGAIKLNQML SLKPCEGAPP QWRLFKDGDY TITVDTRSGT PTLLLSIKTE PERTTQLTYQ
CPVWDGSPLT LDVSQTFPEG TVVRDYYSGQ TDTVQNGQIT LQPADSHGLL LLERAETHAS
APFNWRNATV YFVLTDRFRN GDPTNDHSYG RHKDGMQEIG TFHGGDLRGL TSQLDYLQQL
GVNALWISSP FEQIHGWVGG GTKGDFPHYA YHGYYTQDWT TLDANMGSEA DLRALVDGAH
QRGIRILFDV VMNHAGYATL ADMQEYQFGA LYLSGAERQK ILGDRWTNWR PAAGQSWHSF
NDYINFSDSA AWEKWWGKKW IRTDIGDYDS PGFDDLTLSL AFLPDIKTES TTPSGLPAFY
ANKPDTKAKF IEGYTPRDYL THWLSQWVHD YGIDGFRVDT AKNVELPAWQ QLKTQASAAL
REWKQANPDK ALDDSPFWMT GEAWGHGVMK SDYYRYGFDA MINFDYQEQA AKAVDCLAEM
GPVWQQMADK MQDFNVLSYL SSHDTRLFRE GGDKAAELLL LSPGAVQIFY GDESARPFGP
TGSDPLQGTR SDMNWQDVSG KSAAAVAHWQ RISQFRARHP AIGAGQQTTL TLKHGYGFVR
QYGDDTVMVV WAGRR