| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3828 |
|---|
| Symbol | dppA |
|---|
| ID | 6517520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3698394 |
|---|
| End bp | 3699974 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642748804 |
|---|
| Product | dipeptide ABC transporter periplasmic dipeptide-binding protein |
|---|
| Protein accession | YP_002116568 |
|---|
| Protein GI | 194735610 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.808847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGC TTGGTTTGAG CCTGGTGGCC ATGACCGTTG CAGCCAGCGT GCAGGCCAAA
ACCCTGGTTT ATTGTTCAGA AGGCTCGCCG GAAGGCTTTA ACCCACAGCT CTTTACGTCT
GGCACCACCT ATGATGCCAG CTCCGTACCT ATCTATAACC GTCTGGTTGA ATTCAAAACC
GGCACCACGG AAGTGATCCC GGGTCTTGCT GAGAAGTGGG ATATCAGCGA AGACGGTAAA
ACCTATACGT TCCACCTACG TAAAGGGGTG AAATGGCAAT CCAGCAAGGA TTTCAAACCC
ACGCGCGAGC TGAACGCCGA TGATGTCGTG TTCTCTTTTG ACCGGCAGAA AAACGAGCAG
AACCCGTACC ATAAAGTGTC TGGCGGCAGC TATGAATACT TTGAAGGCAT GGGGCTGCCG
GATCTGATTA GCGAAGTGAA GAAGGTAGAC GATCACACGG TGCAGTTTGT GCTGACGCGT
CCGGAAGCGC CGTTCCTTGC CGATTTAGCC ATGGACTTCG CCTCTATTCT TTCTAAAGAA
TATGCTGACA ACATGCTGAA AGCCGGTACG CCGGAAAAAG TGGATCTGAA CCCGGTCGGC
ACTGGCCCGT TCCAACTGGT GCAATATCAG AAAGATTCCC GCATTCTCTA CAAAGCTTTT
GACGGCTACT GGGGCACGAA GCCGCAGATC GACCGTCTGG TCTTCTCCAT CACCCCTGAC
GCCTCTGTGC GTTACGCCAA ACTGCAGAAG AACGAATGTC AGGTGATGCC GTATCCGAAC
CCGGCGGATA TTGCGCGCAT GAAAGAAGAT AAAAACATCA ACCTGATGGA GCAGGCCGGT
CTGAACGTGG GTTATCTCTC CTACAACGTA CAGAAAAAAC CGCTGGATAA CGTCAAAGTT
CGCCAGGCGT TGACCTATGC CGTGAATAAA GAGGCCATCA TCAAAGCCGT TTATCAGGGC
GCGGGCGTTG CGGCGAAAAA CCTGATCCCG CCGACAATGT GGGGCTACAA CGACGATATT
AAAGACTACG GCTACGATCC GGAAAAAGCG AAGGCGCTGC TGAAAGAAGC CGGTCTGGAA
AAAGGCTTCA CCATCGATCT GTGGGCGATG CCGGTACAGC GTCCCTATAA CCCGAATGCG
CGTCGTATGG CGGAAATGAT CCAGGCGGAC TGGGCGAAGA TTGGCGTTCA GGCCAAAATT
GTCACCTATG AATGGGGCGA ATACCTCAAG CGCGCTAAAG ATGGCGAGCA CCAGACGGTG
ATGATGGGCT GGACCGGCGA TAATGGCGAT CCGGATAACT TCTTCGCCAC GCTGTTCAGC
TGCGATGCCG CCCAGCAAGG CTCCAACTAT TCAAAATGGT GCTACAAGCC GTTTGAAGAC
CTGATTCAGC CTGCGCGTGC GACCGATGAC CACAACAAGC GTATTGAACT CTATAAACAG
GCCCAGGTCG TGATGCATGA CCAGGCGCCA GCGCTGATCA TCGCTCACTC CACGGTTTAT
GAGCCAGTGC GTAAAGAAGT TAAAGGCTAT GTGGTTGATC CATTAGGCAA ACATCACTTC
GAAAACGTCT CTGTCGAATA A
|
|---|
| Protein sequence | MLKLGLSLVA MTVAASVQAK TLVYCSEGSP EGFNPQLFTS GTTYDASSVP IYNRLVEFKT
GTTEVIPGLA EKWDISEDGK TYTFHLRKGV KWQSSKDFKP TRELNADDVV FSFDRQKNEQ
NPYHKVSGGS YEYFEGMGLP DLISEVKKVD DHTVQFVLTR PEAPFLADLA MDFASILSKE
YADNMLKAGT PEKVDLNPVG TGPFQLVQYQ KDSRILYKAF DGYWGTKPQI DRLVFSITPD
ASVRYAKLQK NECQVMPYPN PADIARMKED KNINLMEQAG LNVGYLSYNV QKKPLDNVKV
RQALTYAVNK EAIIKAVYQG AGVAAKNLIP PTMWGYNDDI KDYGYDPEKA KALLKEAGLE
KGFTIDLWAM PVQRPYNPNA RRMAEMIQAD WAKIGVQAKI VTYEWGEYLK RAKDGEHQTV
MMGWTGDNGD PDNFFATLFS CDAAQQGSNY SKWCYKPFED LIQPARATDD HNKRIELYKQ
AQVVMHDQAP ALIIAHSTVY EPVRKEVKGY VVDPLGKHHF ENVSVE
|
|---|
| |