| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3810 |
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| Symbol | |
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| ID | 6516670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 3675687 |
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| End bp | 3677693 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642748788 |
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| Product | putative phosphodiesterase |
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| Protein accession | YP_002116552 |
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| Protein GI | 194735819 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.612302 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCGTCA GCCGCTCGTT AACAATTAAA CAGATGGCAA TGGTTGCGGC CGTTGTCATG
GTGTTTGTTT TTGTCTTTTG CACCGTTTTG TTGTTCCATC TGGTACAGCA GAACCGCTAC
AACACGGCTA CGCAACTGGA AAGCATCGCG CGATCTGTTC GGGAACCTCT TTCTTCCGCG
ATTTTAAAAG CGGATCTCCC CGGCGCGGAA ACCATTCTGG AAAGTATTAA ACCTGCGGGC
GTGGTGAGTC GCGCCGATGT GGTATTGCCG AATCAGTTCC AGGCGTTGCG TAAGCGCTTC
ATTCCTGAAC GCCCCGTCCC GGTTATGGTG ACGCGTCTCT TCGAACTGCC GGTACAAATT
TCTTTGCCGG TTTATTCGCT GGAGCGTCCC GCCAATCCGC AACCGCTGGC CTACCTTGTA
TTGCAGGCGG ATTCGTACCG TATGTACAAA TTCGTCATGA GCGCGCTCTC TACGTTAGTG
ACCATTTACT TACTTTTATC GCTGATCCTG ACGGTGGCCA TCGCCTGGTG CGTAAACCGC
CTGATTGTGC ATCCGCTGCG CAAAATCGCC CGCGAGCTGA ACGACATTCC GCAGCAGGAG
CTGATCGGAC ATCAGCTGGC GTTGCCGCGT CTGCATCAGG ATGATGAAAT TGGGATGCTG
GTGCGCAGCT ATAACCTCAA CCAGCAGCTT ATGCAGCGTC AACGCGAGGA GCAAACGGAC
AACGCGATGC GTTTTCCGGT TTCCGAGCTG CCCAATAAAG CCTTTTTAAT GGCGCTGCTG
GAACAGGTTA TCACCCGCCA ACAGACCACC GCGCTTATTA TCGTGACGTG CGAAACGTTG
CGTGACACGG CAGGCGTGCT GCAAGAAACG CAGCGGGAGA TTCTATTACT GACGTTGGTT
GAGAAGCTGA AGTCGGTGCT GGCGCCGCGC ATGGTGCTTA CGCAGGTCAG CGGCTATGAC
TTTGCCATTA TCGCCCACGG CGTCAAAGAG CCGTGGCACG CCATCACATT AGGTCAGCAA
ATACTCACTA TCATTAATGA ACGACTGCCC ATTCAGGGTA TTCAACTGCG CCCAAGCTGC
AGTATTGGCA TTGCGATGTA TTATGGCGAT CTGACCGCCG AAGAGCTCTA TGGTCGCGCC
GTCTCCGCCG CGTTTACCGC GCGCCGAAAA GGTAAAAATC AGATCCAGTT CTTTGACCCG
GCGCAGATGG AGGCCGCTCA ACAGCGCCTT ACCGAAGAGA GCGATATCCT TACCGCGCTG
GATAATCATC AGTTTGCCAT TTGGCTGCAG CCGCAGGTCG AGATGCGCAG CGGCAACGTA
TTAAGCGCCG AAGCCTTGTT ACGTATGCAG CAGCCGGACG GTAGCTGGGA ATTGCCGGAG
GGGCTGATTG AGCGCATTGA ATCCTGCGGC CTGATGGTCA CAGTAGGCCA TTGGGTGCTG
GAAGAGTCCT GCCGCCAGCT TGCCGCCTGG CAGGAGCGCG GCGTGACATT GCCGCTCTCC
GTCAATCTTT CCGCGTTACA GCTCATGCAC CCTGGCATGG TATCGGAGCT GCTGGAATTG
TTAAACCGCT ATCGTATTCA ACCGGGTACG CTGATTCTTG AGGTCACTGA AAGCCGCCGT
ATCGACGATC CGCACGCTGC CGTCGCTATC TTACGTCCGT TACGTAATGC TGGCGTGCGT
ATCGCACTGG ATGATTTTGG CATGGGTTAC GCGGGGCTGC GCCAGTTACA GCATATGAAG
TCGCTACCGG TCGATATCCT TAAAATTGAT AAAATGTTTG TCGATGGGTT ACCGGATGAT
CACAGTATGG TGACGGCGAT TATCCTGATG GCCCGCAGTC TTAATTTACA ATTGATTGCC
GAGGGCGTGG AGAACGAGGC GCAACGCGCG TGGCTGGAAC AGGCGGGAGT CAACGTCGCG
CAAGGCTTCC TGTTTGCTCG GCCCGTTCCC GCGGATATCT TTGAAGAACG GTATCTGTCG
CACGAAAATC CTGATTACAA AAGTTAA
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| Protein sequence | MRVSRSLTIK QMAMVAAVVM VFVFVFCTVL LFHLVQQNRY NTATQLESIA RSVREPLSSA
ILKADLPGAE TILESIKPAG VVSRADVVLP NQFQALRKRF IPERPVPVMV TRLFELPVQI
SLPVYSLERP ANPQPLAYLV LQADSYRMYK FVMSALSTLV TIYLLLSLIL TVAIAWCVNR
LIVHPLRKIA RELNDIPQQE LIGHQLALPR LHQDDEIGML VRSYNLNQQL MQRQREEQTD
NAMRFPVSEL PNKAFLMALL EQVITRQQTT ALIIVTCETL RDTAGVLQET QREILLLTLV
EKLKSVLAPR MVLTQVSGYD FAIIAHGVKE PWHAITLGQQ ILTIINERLP IQGIQLRPSC
SIGIAMYYGD LTAEELYGRA VSAAFTARRK GKNQIQFFDP AQMEAAQQRL TEESDILTAL
DNHQFAIWLQ PQVEMRSGNV LSAEALLRMQ QPDGSWELPE GLIERIESCG LMVTVGHWVL
EESCRQLAAW QERGVTLPLS VNLSALQLMH PGMVSELLEL LNRYRIQPGT LILEVTESRR
IDDPHAAVAI LRPLRNAGVR IALDDFGMGY AGLRQLQHMK SLPVDILKID KMFVDGLPDD
HSMVTAIILM ARSLNLQLIA EGVENEAQRA WLEQAGVNVA QGFLFARPVP ADIFEERYLS
HENPDYKS
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