Gene SeSA_A3802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3802 
Symbol 
ID6518635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3665646 
End bp3666674 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content51% 
IMG OID642748781 
Productputative ribonuclease 
Protein accessionYP_002116545 
Protein GI194736490 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN)
[TIGR00766] ribonuclease, putative 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGG AAAATGACGT AAAACGCCCT ATTCAGGAAC TGGAGCACGA CCCGATACAA 
AAAATAGAAA CGCAGCCGCA TGACGCCCCG GAAAAAAACG AAAAGGCAAA TCAGGCGTTG
CATTCCGTCA CCTCCCTGGT GCAAAAAATT CAGCGTCAAC CAATGGTGGC CCACCTCATT
CGCGCGACCG AACGTTTTAA CGATCGACTG GGTAATCAGT TTGGCGCGGC TATCACCTAC
TTTTCGTTTC TGTCGATGAT CCCGATAATG ATGGTGTCCT TTGCCGCGGC AGGTTTTATC
CTCGCCTCGC ACCCTAATCT ACTGGAAGAT ATTTTCAGCA AGATATTGAT GAATGTGAGC
GATCCTACGC TGGCGTCCAC GCTTAAAAAT ACGATTAATA CGGCGGTTCA ACAGCGTACC
ACGGTAGGGC TGGTCGGACT GGGTATCGCG CTCTATTCCG GCGTTAACTG GATGGGCAAC
CTGCGGGAAG CGATTCGCGC CCAGTCACGG GACGTCTGGG AGCGCAAGCC GCAGGATCAG
GAGAAAATCT GGCTCAAATA TCTACGCGAT TTTATCTCGC TGATTGGATT ATTAATCGCT
TTAATCATTA CGCTGTCCAT TACTTCCATC GCCGGTTCCG CCCAGCAGAT GATCATCTCC
GCCTTGTATC TCGACAGCAT CGAATGGTTA AAACCGGCCT GGCATTTGAT CGGTCTGGCC
ATCTCTATTT TTGCCAACTA TCTGCTTTTC TTCTGGATTT TCTGGCGACT GCCTCGCCAT
CGTCCCCGTA AAAAAGCGTT GATTCGCGGG ACATTTATTG CCGCTATCGG TTTTGAGGTG
ATTAAAATCA TTATGACCTA TACGCTGCCG TCACTGGTGA AATCGCCTTC CGGCGCAGCG
TTTGGCTCCG TACTCGGTCT GATGGCCTTC TTCTACTTTT TTGCCCGTCT GACGTTATTC
TGCGCGGCCT GGATAGCCAC CGCCGAATAC AAGGACGACC CGCGAATGCC GGGTAAAACG
CAACGCTAG
 
Protein sequence
MTQENDVKRP IQELEHDPIQ KIETQPHDAP EKNEKANQAL HSVTSLVQKI QRQPMVAHLI 
RATERFNDRL GNQFGAAITY FSFLSMIPIM MVSFAAAGFI LASHPNLLED IFSKILMNVS
DPTLASTLKN TINTAVQQRT TVGLVGLGIA LYSGVNWMGN LREAIRAQSR DVWERKPQDQ
EKIWLKYLRD FISLIGLLIA LIITLSITSI AGSAQQMIIS ALYLDSIEWL KPAWHLIGLA
ISIFANYLLF FWIFWRLPRH RPRKKALIRG TFIAAIGFEV IKIIMTYTLP SLVKSPSGAA
FGSVLGLMAF FYFFARLTLF CAAWIATAEY KDDPRMPGKT QR