Gene SeSA_A3776 details

Gene Information

• Locus tag: SeSA_A3776
• Symbol: nikR
• ID: 6518829
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633
• Kingdom: Bacteria
• Replicon accession: NC_011094
• Strand: +
• Start bp: 3635299
• End bp: 3635700
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642748755
• Product: nickel responsive regulator
• Protein accession: YP_002116519
• Protein GI: 194734904
• COG category: [K] Transcription
• COG ID: [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain
• TIGRFAM ID: [TIGR02793] nickel-responsive transcriptional regulator NikR

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.472074
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 25
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAACGTG TCACCATCAC CCTCGATGAC GATTTACTGG AAACGCTGGA CAGCCTGAGC 
CAGCGACGCG GCTATAACAA TCGCTCCGAA GCGATCCGTG ATATTTTGCG CGGCGCTCTG 
GCGCAGGAGG CCACCCAGGA ACACGGTACA CAGGGTTTCG CGGTACTTTC ATATGTTTAT 
GAACATGAGA AACGGGATTT AGCCAGCCGC ATCGTCTCCA CCCAGCATCA TCATCATGAT 
TTATCCGTCG CCACGCTGCA CGTCCATATC AACCACGATG ACTGTCTGGA GATCGCCGTT 
CTGAAGGGCG ATATGGGCGA CGTACAGCAT TTTGCCGATG ATGTTATCGC CCAGCGCGGC 
GTGCGCCACG GCCACTTGCA GTGTTTGCCG AAAGAAGACT AA 

 

Protein sequence

MQRVTITLDD DLLETLDSLS QRRGYNNRSE AIRDILRGAL AQEATQEHGT QGFAVLSYVY 
EHEKRDLASR IVSTQHHHHD LSVATLHVHI NHDDCLEIAV LKGDMGDVQH FADDVIAQRG 
VRHGHLQCLP KED