Gene SeSA_A3774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3774 
Symbol 
ID6518086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3633528 
End bp3634577 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content52% 
IMG OID642748753 
Productinner membrane protein YhhT 
Protein accessionYP_002116517 
Protein GI194738241 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.505829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCG CTCAACCCGA CAAAACGGGT ATGCATATTC TGCTGAAACT GGCCTCCCTG 
GTTATTATTC TCGCCGGGAT TCATGCCGCG GCGGATATTA TTGTACAACT CTTGCTGGCG 
CTCTTTTTCG CCATTGTTCT TAATCCATTA GTGACCTGGT TTATTCGCCG GGGCGTGAAG 
CGACCGCTGG CGATTACTAT CGTGGTGGTC GTCATGCTGA TCGTGCTTAC CGCGCTGGTG 
GGTGTGCTTG CTGCATCGCT TAATGAATTT ATCGCTATGC TGCCTAAATA CAGCAAGGAG 
CTGACGCGTA AGGTCTTACA CCTTCAGGAG TTAATGCCCT TCCTGAATTT ACATATGTCG 
CCGGAACGTA TGCTCCGCGG GATGGATTCC GATAAAATCA TGCTCTTCAC CACAACATTA 
ATGACCGGCG TATCGGGCGC GATGGCAAGC ATTGTGCTGC TGGTGATGAC CGTGGTTTTT 
ATGCTGTTTG AGGTGCGTCA CGTGCCTTAT AAATTACGTT TCGCGCTAAA CAATCCACAA 
ATCCATATTG CCGGCCTGCA CCGCGCCCTG AAAGGCGTCT CGCATTATCT GGCGCTGAAA 
ACGCTGCTCA GTTTATGGAC GGGCGCGATT ATCTGGCTGG GACTGGCGTT AATGGATATT 
CAGTTTGCGC TAATGTGGGG CGTACTGGCC TTTTTGCTCA ATTACGTTCC TAATATCGGC 
TCGGTGATTT CCGCCGTTCC CCCCATGATT CAGGCGCTGT TATTTAACGG TTTTTACGAG 
TGCGTACTGG TCGGCGCGCT CTTTTTGGTG GTCCATATGG TGATTGGCAA CATTATGGAG 
CCACGCATGA TGGGCCATCG TCTGGGAATG TCCACGCTGG TGGTATTTCT TTCGTTATTG 
GTCTGGGGAT GGCTATTAGG CCCGGTCGGG ATGCTCTTGT CCGTTCCTTT GACCAGCGTC 
TGCAAAATCT GGATGGAAAC TACTAAAGGC GGCAGCAAAC TGGCGATCTT GCTGGGGCCA 
GGCCGACCGA AAAGCCGTTT ACCGGGATGA
 
Protein sequence
MATAQPDKTG MHILLKLASL VIILAGIHAA ADIIVQLLLA LFFAIVLNPL VTWFIRRGVK 
RPLAITIVVV VMLIVLTALV GVLAASLNEF IAMLPKYSKE LTRKVLHLQE LMPFLNLHMS 
PERMLRGMDS DKIMLFTTTL MTGVSGAMAS IVLLVMTVVF MLFEVRHVPY KLRFALNNPQ 
IHIAGLHRAL KGVSHYLALK TLLSLWTGAI IWLGLALMDI QFALMWGVLA FLLNYVPNIG 
SVISAVPPMI QALLFNGFYE CVLVGALFLV VHMVIGNIME PRMMGHRLGM STLVVFLSLL 
VWGWLLGPVG MLLSVPLTSV CKIWMETTKG GSKLAILLGP GRPKSRLPG