Gene SeSA_A3773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3773 
Symbol 
ID6519628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3632179 
End bp3633396 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content59% 
IMG OID642748752 
Productmajor facilitator superfamily transporter 
Protein accessionYP_002116516 
Protein GI194736660 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.955026 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAC CCGTCGCTGA ACCGGCGCTA AACGGATTGC GCCTCAATCT GCGTATTGTC 
TCCATTGTGA TGTTTAACTT TGCCAGCTAC CTGACCATCG GCCTGCCGCT CGCCGTCTTG 
CCAGGCTATG TGCATGATGC GATGGGATTC AGCGCGTTCT GGGCGGGGCT TATTATCAGC 
CTGCAATACT TCGCCACTCT GTTAAGCCGT CCCCATGCCG GGCGGTATGC GGATGTATTA 
GGGCCGAAAA AAATCGTTGT CTTTGGCTTA TGCGGCTGTT TTTTAAGCGG ACTCGGCTAC 
CTGCTGGCGG ATATCGCCAG CGCCTGGCCG CTGATCAGTT TGTTGCTACT GGGGCTGGGT 
CGCGTGATTT TGGGGATTGG GCAAAGTTTT GCCGGCACCG GTTCGACACT GTGGGGCGTC 
GGCGTCGTCG GGTCGTTGCA TATTGGTCGG GTTATCTCCT GGAACGGTAT CGTCACCTAC 
GGCGCAATGG CGATGGGCGC GCCGCTGGGC GTGCTGTGTT ATGCCTGGGG CGGGTTACAG 
GGGCTGGCGC TAACGGTGAT GGGCGTGGCG CTGTTGGCGA TACTGTTAGC CCTTCCACGT 
CCGTCGGTGA AGGCGAACAA AGGCAAGCCG CTGCCGTTTC GCGCGGTGCT GGGGCGTGTC 
TGGCTGTATG GTATGGCGTT GGCGCTGGCC TCGGCAGGGT TTGGCGTCAT CGCGACGTTT 
ATTACCTTAT TTTATGATGC TAAAGGCTGG GATGGTGCCG CCTTTGCGCT CACGTTATTT 
AGCGTCGCGT TTGTCGGCAC GCGTTTGCTG TTCCCTAACG GTATCAATCG TTTAGGCGGG 
TTGAATGTCG CCATGATCTG CTTTGGCGTG GAGATTATTG GTCTGTTACT GGTGGGAACG 
GCAGCCATGC CGTGGATGGC AAAAATCGGC GTTTTACTCA CGGGGATGGG GTTTTCGCTG 
GTCTTTCCGG CGCTGGGCGT GGTGGCCGTC AAAGCCGTGC CGCCGCAGAA CCAGGGCGCG 
GCGCTGGCGA CCTATACCGT CTTTATGGAT ATGTCTTTGG GGGTTACCGG GCCGCTGGCG 
GGGCTGGTGA TGACCTGGGC GGGCGTGCCG GTGATTTATC TGGCGGCAGC CGGGCTGGTA 
GCGATGGCGT TATTGCTGAC CTGGCGCTTA AAAAAACGGC CTCCGTCTGC ACTGCCGGAG 
GCCGCATCAT CATCGTAA
 
Protein sequence
MPEPVAEPAL NGLRLNLRIV SIVMFNFASY LTIGLPLAVL PGYVHDAMGF SAFWAGLIIS 
LQYFATLLSR PHAGRYADVL GPKKIVVFGL CGCFLSGLGY LLADIASAWP LISLLLLGLG 
RVILGIGQSF AGTGSTLWGV GVVGSLHIGR VISWNGIVTY GAMAMGAPLG VLCYAWGGLQ 
GLALTVMGVA LLAILLALPR PSVKANKGKP LPFRAVLGRV WLYGMALALA SAGFGVIATF 
ITLFYDAKGW DGAAFALTLF SVAFVGTRLL FPNGINRLGG LNVAMICFGV EIIGLLLVGT 
AAMPWMAKIG VLLTGMGFSL VFPALGVVAV KAVPPQNQGA ALATYTVFMD MSLGVTGPLA 
GLVMTWAGVP VIYLAAAGLV AMALLLTWRL KKRPPSALPE AASSS