| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3683 |
|---|
| Symbol | aroB |
|---|
| ID | 6515756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3538088 |
|---|
| End bp | 3539176 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642748665 |
|---|
| Product | 3-dehydroquinate synthase |
|---|
| Protein accession | YP_002116429 |
|---|
| Protein GI | 194734398 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0337] 3-dehydroquinate synthetase |
|---|
| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0345563 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGGA TTACAGTCAC TCTCGGGGAA CGTAGTTACC CGATCACCAT CGCGGCTGGT
TTGTTTAACG AACCAGCTTC ATTCTTGCCG CTGAAATCAG GCGATCAGGT CATGTTAGTG
ACCAACGAAA CCCTGGCGCC GCTTTATCTG GACAAGGTTC GCGGCGTACT CGAACGGGCG
GGCGTTAACG TAGACAGCGT GATTCTTCCT GACGGCGAGC AGTATAAGAG CCTGACGGTG
CTGGATACGG TGTTTACGGC GTTACTGAAA AAACCGCATG GTCGTGATAC CACGCTGGTC
GCGCTTGGCG GCGGCGTGAT TGGCGATCTC ACCGGTTTTG CGGCGGCCAG CTACCAGCGA
GGCGTACGTT TCATCCAGGT GCCAACTACC TTACTGTCGC AGGTTGATTC TTCCGTGGGC
GGGAAAACCG CCGTCAACCA TCCCCTTGGC AAAAACATGA TTGGCGCGTT TTACCAACCC
GCTTCTGTGG TTGTCGATCT TGATTGCCTG AAAACGCTTC CCGCACGCGA ACTGGCATCG
GGACTGGCAG AGGTGATCAA ATACGGCATT ATACTCGACG CAGACTTCTT CACCTGGCTT
GAGGAGAATC TGGATGCGCT ATTGCGTCTG GACGGCCCGG CGATGGCGTA CTGTATTCGT
CGTTGTTGTG AGCTGAAAGC CGAAGTTGTT GCCGCCGACG AGCGTGAAGC GGGCTTACGT
GCTTTACTGA ATCTTGGACA TACCTTTGGC CACGCCATTG AAGCGGAAAT GGGATATGGC
AATTGGTTAC ATGGTGAAGC CGTTGCCGCA GGTATAGTGA TGGCTGCGCG CGCATCCGAG
CGTTTGGGGC AGTTCAGTTC TGCTGATACG CAGCGCATCA TCGCTCTACT CGAACGGGCC
GGGTTGCCAG TCAATGGCCC TTGCGAGATG TCCGCGCAGG ACTATTTGCC GCACATGCTG
CGAGATAAAA AAGTGTTAGC GGGGGAGCTG CGTTTAGTGC TTCCGCTGGC CATAGGGAAA
AGTGAAGTGC GCGGCGGAGT GTCGCACGAA GTCGTTCTTA GCGCGATTGC TGACTGTCAG
CAGGCGTAA
|
|---|
| Protein sequence | MERITVTLGE RSYPITIAAG LFNEPASFLP LKSGDQVMLV TNETLAPLYL DKVRGVLERA
GVNVDSVILP DGEQYKSLTV LDTVFTALLK KPHGRDTTLV ALGGGVIGDL TGFAAASYQR
GVRFIQVPTT LLSQVDSSVG GKTAVNHPLG KNMIGAFYQP ASVVVDLDCL KTLPARELAS
GLAEVIKYGI ILDADFFTWL EENLDALLRL DGPAMAYCIR RCCELKAEVV AADEREAGLR
ALLNLGHTFG HAIEAEMGYG NWLHGEAVAA GIVMAARASE RLGQFSSADT QRIIALLERA
GLPVNGPCEM SAQDYLPHML RDKKVLAGEL RLVLPLAIGK SEVRGGVSHE VVLSAIADCQ
QA
|
|---|
| |