| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3680 |
|---|
| Symbol | rpe |
|---|
| ID | 6517287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3535002 |
|---|
| End bp | 3535679 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642748662 |
|---|
| Product | ribulose-phosphate 3-epimerase |
|---|
| Protein accession | YP_002116426 |
|---|
| Protein GI | 194735372 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
|---|
| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGT ATTTGATTGC CCCCTCAATT CTGTCGGCTG ATTTTGCTCG CCTGGGTGAA
GACACCGCCA AAGCGCTGGC TGCCGGTGCT GATGTTGTAC ACTTTGACGT CATGGATAAT
CACTATGTGC CGAACCTGAC TATCGGCCCG ATGGTGCTGA AATCCCTGCG TCAGTACGGT
ATTACCGCGC CTATTGATGT CCACCTGATG GTCAAGCCAG TCGACCGTAT CGTGCCCGAC
TTTGCCGCCG CTGGCGCGAG CATCATTACC TTTCACCCGG AAGCCTCCGA ACATGTTGAC
CGCACGCTAC AGCTGATTAA AGAGCACGGC TGTAAAGCGG GGCTGGTATT CAACCCGGCA
ACGCCGCTCA GTTATCTCGA TTACGTCATG GACAAACTGG ATGTGATCCT GCTGATGTCC
GTGAACCCAG GCTTCGGCGG CCAGTCTTTT ATTCCGCAGA CGCTGGATAA ACTGCGCGAA
GTGCGACGCC GCATTGATGC GTCCGGTTAC GACATTCGCC TGGAAGTGGA TGGCGGCGTG
AAGGTGAACA ATATCGGCGA GATCGCCGCA GCAGGCGCGG ACATGTTTGT TGCGGGGTCG
GCAATTTTCG ATAAGCCCGA CTACAAAAAA GTGATTGATG AAATGCGCAG TGAGCTGGCA
AAGGTAAGTC ATGGATAA
|
|---|
| Protein sequence | MKQYLIAPSI LSADFARLGE DTAKALAAGA DVVHFDVMDN HYVPNLTIGP MVLKSLRQYG
ITAPIDVHLM VKPVDRIVPD FAAAGASIIT FHPEASEHVD RTLQLIKEHG CKAGLVFNPA
TPLSYLDYVM DKLDVILLMS VNPGFGGQSF IPQTLDKLRE VRRRIDASGY DIRLEVDGGV
KVNNIGEIAA AGADMFVAGS AIFDKPDYKK VIDEMRSELA KVSHG
|
|---|
| |