Gene SeSA_A3674 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3674 
SymbolnirC 
ID6516795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3524392 
End bp3525201 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content57% 
IMG OID642748656 
Productnitrite transporter NirC 
Protein accessionYP_002116420 
Protein GI194734889 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.721979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACAG ACACTATCAA TAAGTGTGCG GCTAACGCTG CGCGCATCGC ACGCCTGTCG 
GCGAATAATC CGCTCGGCTT CTGGGTCAGT TCGGCAATGG CCGGGGCTTA TGTCGGTCTC
GGCATCATTC TTATTTTCAC CCTCGGCAAT CTGCTCGACC CGTCAGTGCG TCCTTTGGTG
ATGGGAGCGA CCTTTGGTAT CGCCTTAACG CTGGTCATCA TCGCCGGTTC CGAACTGTTT
ACCGGCCACA CCATGTTCCT GACGCTGGGC GTCAAAGCTG GCACCATCAG CCACGGTCAA
ATGTGGGCTA TCCTGCCGCA AACCTGGCTT GGCAACCTGG TCGGCTCCGT CTTTGTCGCC
CTGCTTTACA GCTGGGGCGG CGGCAGTTTG TTGCCGGTCG ATACCAGCAT CGTTCACTCA
GTCGCGCTGG CGAAAACCAC CGCGCCCGCC ACGGTACTGT TCTTCAAAGG CGCGCTGTGT
AACTGGCTGG TTTGTCTGGC AATCTGGATG GCGATCCGCA CCGAAGGCAC GGCGAAATTT
CTTGCTATCT GGTGGTGCCT GCTGGCGTTT ATCGCTTCCG GCTACGAGCA CTCCGTCGCG
AATATGACGC TGTTCGCCCT CTCCTGGTTT GGTCATCACA GCGACGCTTA TACCCTGTCC
GGAATCGGAC ACAATCTGTT GTGGGTCACT CTGGGTAATA CTTTGTCCGG CGTCGTGTTC
ATGGGATTGG GTTATTGGTA TGCTACGCCG AAATCGGAGC GTCCGGCTCC GGCAAAAATC
AATCAGCCAG AGGCTGCTGC CAATAATTAA
 
Protein sequence
MFTDTINKCA ANAARIARLS ANNPLGFWVS SAMAGAYVGL GIILIFTLGN LLDPSVRPLV 
MGATFGIALT LVIIAGSELF TGHTMFLTLG VKAGTISHGQ MWAILPQTWL GNLVGSVFVA
LLYSWGGGSL LPVDTSIVHS VALAKTTAPA TVLFFKGALC NWLVCLAIWM AIRTEGTAKF
LAIWWCLLAF IASGYEHSVA NMTLFALSWF GHHSDAYTLS GIGHNLLWVT LGNTLSGVVF
MGLGYWYATP KSERPAPAKI NQPEAAANN