Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3630 |
Symbol | rpsC |
ID | 6515869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 3490356 |
End bp | 3491057 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642748612 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_002116376 |
Protein GI | 194737846 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0724577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.691725 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAGA AAGTACATCC TAATGGTATT CGCCTGGGTA TTGTAAAACC ATGGAACTCT ACCTGGTTTG CGAACACCAA AGAATTCGCT GACAACCTGG ACAGCGATTT TAAAGTACGT CAGTACCTGA CGAAGGAACT GGCTAAAGCG TCTGTATCTC GTATCGTTAT CGAGCGTCCG GCTAAGAGCA TCCGTGTGAC TATTCACACC GCTCGCCCGG GTATCGTTAT CGGTAAAAAA GGTGAAGACG TAGAAAAACT GCGTAAGGTC GTAGCGGATA TCGCTGGCGT TCCTGCACAG ATCAACATCG CCGAAGTTCG TAAACCTGAA CTGGACGCTA AACTGGTTGC TGACAGCATC ACTTCTCAGC TGGAACGTCG CGTTATGTTC CGTCGTGCGA TGAAGCGTGC TGTACAGAAC GCCATGCGTC TGGGCGCTAA AGGTATCAAA GTTGAAGTTA GCGGCCGTCT GGGCGGCGCG GAAATCGCAC GTACCGAATG GTACCGCGAA GGTCGCGTAC CGCTGCACAC TCTGCGTGCT GACATCGACT ACAACACCTC TGAAGCGCAC ACCACTTATG GTGTAATCGG CGTTAAAGTG TGGATCTTCA AAGGCGAGAT CCTGGGTGGT ATGGCTGCTG TTGAACAACC GGAAAAACCG GCTGCTCAAC CGAAAAAGCA GCAGCGTAAA GGCCGTAAAT AA
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Protein sequence | MGQKVHPNGI RLGIVKPWNS TWFANTKEFA DNLDSDFKVR QYLTKELAKA SVSRIVIERP AKSIRVTIHT ARPGIVIGKK GEDVEKLRKV VADIAGVPAQ INIAEVRKPE LDAKLVADSI TSQLERRVMF RRAMKRAVQN AMRLGAKGIK VEVSGRLGGA EIARTEWYRE GRVPLHTLRA DIDYNTSEAH TTYGVIGVKV WIFKGEILGG MAAVEQPEKP AAQPKKQQRK GRK
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