Gene SeSA_A3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3564 
SymbollytS 
ID6515490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3440113 
End bp3440604 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content53% 
IMG OID642748550 
Productrod shape-determining protein MreD 
Protein accessionYP_002116320 
Protein GI194737883 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.331411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCGA GCTATCGTAG CCAGGGGCGC TGGGTTATCT GGCTCTCGTT TCTTATTGCG 
CTGTTGCTGC AAATCATGCC CTGGCCGGAC GACATCATTG TTTTCCGGCC AAACTGGGTT
TTGCTCATCT TACTGTACTG GATTCTGGCC CTGCCGCACC GCGTAAATGT GGGGACGGGA
TTTGTGATGG GTGCCATACT TGATCTCATC AGCGGTTCCA CACTTGGCGT GCGCGCTCTG
TCGATGAGTA TTGTCGCCTA CCTGGTCGCT CTGAAATTCC AGCTCTTCCG TAACCTGGCG
CTCTGGCAGC AGGCGCTGGT GGTAATGTTG CTTTCACTGG CCGTGGACAT TATTGTTTTC
TGGGCCGAGT TTTTAGTGAT CAACGTCTCT TTCAGACCGG AAGTGTTCTG GAGTAGTGTA
GTCAATGGCG TGCTGTGGCC CTGGCTCTTT TTGCTGATGC GTAAAGTACG CCAGCAGTTT
GCTGTGCAAT AA
 
Protein sequence
MVASYRSQGR WVIWLSFLIA LLLQIMPWPD DIIVFRPNWV LLILLYWILA LPHRVNVGTG 
FVMGAILDLI SGSTLGVRAL SMSIVAYLVA LKFQLFRNLA LWQQALVVML LSLAVDIIVF
WAEFLVINVS FRPEVFWSSV VNGVLWPWLF LLMRKVRQQF AVQ