Gene SeSA_A3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3544 
SymboloadA 
ID6517321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3418264 
End bp3420033 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content64% 
IMG OID642748530 
Productoxaloacetate decarboxylase 
Protein accessionYP_002116300 
Protein GI194735418 
COG category[C] Energy production and conversion
[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit
[COG5016] Pyruvate/oxaloacetate carboxyltransferase 
TIGRFAM ID[TIGR01108] oxaloacetate decarboxylase alpha subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTG CCATTACCGA TGTCGTCCTG CGCGACGCCC ACCAGTCTCT GTTCGCCACC 
CGCCTGCGCC TTGACGATAT GCTGCCGATT GCCACTCAGC TTGACGATGT CGGCTACGGC
TCCCTCGAAT GCTGGGGCGG CGCCACCTTT GACGCCTGCA TTCGCTTTCT CGGCGAAGAC
CCGTGGCTGC GCCTGCGCGA ACTCAAAAAA GCCATGCCCA AAACCCCGCT GCAGATGCTG
CTGCGTGGCC AGAACCTGCT CGGCTACCGC CACTACGCCG ATGACGTGGT GGAGCGTTTT
GTCGAACGCG CGGTGAAAAA CGGCATGGAC GTGTTCCGCG TCTTCGATGC CATGAACGAC
CCGCGCAATA TGAAAGCCGC CCTGCAGGCG GTGCGCAGCC ACGGCGCACA CGCCCAGGGC
ACGCTCTCCT ACACCACCAG CCCGGCCCAC ACCCTGCAGA CCTGGCTGGA CCTGACCGAA
CAGCTGCTGG AAACCGGCGT TGACTCGATT GCCATCAAGG ATATGTCCGG CATTCTCACG
CCGATGGCGG CGTATGAGCT GGTCAGCGAA ATCAAAAAAC GTTTTGAGGT GCGCCTGCAC
CTGCACTGTC ACGCCACCAC CGGGATGGCG GAGATGGCCC TGCTGAAGGC TATCGAGGCG
GGCGTTGACG GCGTGGACAC GGCGATTTCC TCCATGAGCG CCACCTACGG CCACCCGGCC
ACCGAGGCGC TGGTTGCCAC GCTTGCCGGC ACAAAATATG ACACCGGGCT GGATATCCTG
AAGCTGGAAA GCATCGCGGC GTACTTCCGC GAGGTGCGCA AAAAATATCA CGCCTTTGAA
GGCCAGCTGA AAGGCTACGA CAGCCGCATT CTGGTGGCGC AGGTGCCGGG CGGAATGCTG
ACCAACCTCG AAAGCCAGCT GAAGCAGCAG AACGCGGCGG ACAAACTCGA CCAGGTGCTG
GCGGAAATCC CCCGCGTGCG CGAGGACCTC GGCTTTATCC CGCTGGTGAC CCCCACCTCG
CAGATTGTCG GCACCCAGTC GGTGCTCAAC GTCCTGACCG GCGAACGCTA CAAGACCATC
GCGAAGGAAA CCGCCGGGAT ACTGAAAGGC GAATACGGCC ACACCCCGGT GCCGGTTAAC
GCCGCGTTAC AGGCCCGCGT GCTGGAAGGG GCAGCCCCGG TGACCTGCCG TCCGGCGGAT
TTACTCAAAC CGGAACTGGC TGAACTGGAA GCGGACGTCA GGCGCCAGGC GCAGGAGAAG
GGCATCCAGC TTGCGGGAAA CGCCATCGAC GACGTGCTCA CCGTGGCGCT GTTCCCGCAA
CCCGGCCTCA AATTCCTTGA GAACCGCCAC AACCCGGCGG CGTTTGAGCC GGTGCCGCAG
GCGGAAGCCG CGCAGCCGGT GGCAAAAGCA GAGAAGCCTG CCGCCTCCGG TATCTACACC
GTGGAAGTGG AAGGCAAGGC CTTTGTGGTG AAGGTCAGCG ACGGCGGCGA TATCAGCCAG
CTCACTGCTG CCACCCCGTC TTCCGCACCG GTTCAGGCAG CCGCCCCGGC AGGAGCAGGC
ACCCCGGTCA CCGCGCCGCT GGCGGGCAAC ATCTGGAAGG TGATTGCCAC CGAGGGCCAG
ACGGTGGCCG AAGGCGATGT GCTGCTGATT CTGGAGGCCA TGAAGATGGA AACCGAAATC
CGCGCTGCGC AGGCCGGAAC CGTGCGCGGC ATCGCGGTGA AGTCCGGGGA CGCGGTTTCC
GTCGGCGACA CCCTGATGAC GCTGGCGTAA
 
Protein sequence
MTIAITDVVL RDAHQSLFAT RLRLDDMLPI ATQLDDVGYG SLECWGGATF DACIRFLGED 
PWLRLRELKK AMPKTPLQML LRGQNLLGYR HYADDVVERF VERAVKNGMD VFRVFDAMND
PRNMKAALQA VRSHGAHAQG TLSYTTSPAH TLQTWLDLTE QLLETGVDSI AIKDMSGILT
PMAAYELVSE IKKRFEVRLH LHCHATTGMA EMALLKAIEA GVDGVDTAIS SMSATYGHPA
TEALVATLAG TKYDTGLDIL KLESIAAYFR EVRKKYHAFE GQLKGYDSRI LVAQVPGGML
TNLESQLKQQ NAADKLDQVL AEIPRVREDL GFIPLVTPTS QIVGTQSVLN VLTGERYKTI
AKETAGILKG EYGHTPVPVN AALQARVLEG AAPVTCRPAD LLKPELAELE ADVRRQAQEK
GIQLAGNAID DVLTVALFPQ PGLKFLENRH NPAAFEPVPQ AEAAQPVAKA EKPAASGIYT
VEVEGKAFVV KVSDGGDISQ LTAATPSSAP VQAAAPAGAG TPVTAPLAGN IWKVIATEGQ
TVAEGDVLLI LEAMKMETEI RAAQAGTVRG IAVKSGDAVS VGDTLMTLA