| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3540 |
|---|
| Symbol | |
|---|
| ID | 6517354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 3413647 |
|---|
| End bp | 3415002 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642748526 |
|---|
| Product | serine endoprotease |
|---|
| Protein accession | YP_002116296 |
|---|
| Protein GI | 194735465 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC ACACCCAGCT GTTAAGTGCA TTAGCGTTAA GTGTCGGGTT AACTCTTTCG
GCGCCGTTTC CAGCCCTTGC ATCGATACCA GGCCAGGCGA CGCTGCCAAG CCTTGCCCCT
ATGCTGGAGA AAGTGCTGCC TGCTGTCGTC AGCGTAAAAG TCGAGGGAAC CGCCGCCCAG
AGCCAAAAAG TGCCGGAGGA GTTTAAAAAA TTCTTTGGCG AGGATCTGCC AGACCAGCCG
TCCCAGCCGT TTGAAGGACT CGGTTCGGGG GTGATTATCG ATGCCGCGAA AGGCTATGTA
TTAACCAATA ATCATGTGAT TAATCAGGCA CAAAAGATCA GCATTCAACT GAATGACGGA
CGCGAATTCG ACGCGAAGCT GATCGGCGGC GACGACCAGA GCGATATCGC TCTGTTACAA
ATTCAGAATC CCAGCAAGTT AACGCAAATT GCCATCGCCG ATTCCGACAA ACTCCGCGTC
GGCGATTTCG CCGTGGCGGT CGGTAATCCG TTTGGTCTTG GACAAACCGC CACCTCCGGG
ATTATTTCAG CGCTGGGACG CAGCGGGCTT AATCTGGAAG GGCTTGAGAA CTTTATTCAA
ACCGATGCCT CTATTAACCG CGGCAACTCC GGCGGCGCGC TGCTTAACCT GAACGGCGAG
CTGATCGGGA TTAATACCGC GATCCTCGCG CCAGGTGGCG GGAGTATCGG CATTGGCTTT
GCTATTCCTT CCAATATGGC GCAGACGCTG GCGCAGCAGT TGATTCAGTT CGGCGAAATC
AAACGCGGAT TGCTGGGAAT TAAAGGCACT GAAATGACCG CTGATATCGC CAAGGCATTC
AAACTGAACG TTCAGCGTGG CGCTTTTGTC AGCGAGGTTT TACCCAATTC AGGTTCGGCG
AAGGCCGGGG TGAAATCCGG AGACGTGATT ATCAGTCTTA ACGGTAAGCC GCTGAATAGC
TTTGCCGAAC TGCGTTCACG TATCGCCACC ACCGAACCGG GCACGAAAGT GAAGCTGGGC
CTGCTGCGCG ATGGTAAGCC GCTGGAGGTG GAAGTCACGC TGGATTCCAA TACCTCTTCT
TCCGCCAGCG CCGAAATGAT CGCCCCGGCG TTGCAAGGCG CGACGTTGAG CGACGGCCAG
CTGAAAGACG GGACGAAAGG CGTTAAGGTT GATAGCGTCG AAAAAAGCAG TCCTGCCGCG
CAGGCCGGTT TGCAAAAAGA TGATGTTATC ATCGGCGTTA ACCGCGATCG TATCAGTTCT
ATCGCCGAAA TGCGCAAAGT GATGGCGGCA AAACCGTCCA TCATTGCTCT TCAGGTAGTA
CGCGGCAACG AGAACATTTA TCTATTGCTA CGCTAA
|
|---|
| Protein sequence | MKKHTQLLSA LALSVGLTLS APFPALASIP GQATLPSLAP MLEKVLPAVV SVKVEGTAAQ
SQKVPEEFKK FFGEDLPDQP SQPFEGLGSG VIIDAAKGYV LTNNHVINQA QKISIQLNDG
REFDAKLIGG DDQSDIALLQ IQNPSKLTQI AIADSDKLRV GDFAVAVGNP FGLGQTATSG
IISALGRSGL NLEGLENFIQ TDASINRGNS GGALLNLNGE LIGINTAILA PGGGSIGIGF
AIPSNMAQTL AQQLIQFGEI KRGLLGIKGT EMTADIAKAF KLNVQRGAFV SEVLPNSGSA
KAGVKSGDVI ISLNGKPLNS FAELRSRIAT TEPGTKVKLG LLRDGKPLEV EVTLDSNTSS
SASAEMIAPA LQGATLSDGQ LKDGTKGVKV DSVEKSSPAA QAGLQKDDVI IGVNRDRISS
IAEMRKVMAA KPSIIALQVV RGNENIYLLL R
|
|---|
| |