Gene SeSA_A3531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3531 
Symbol 
ID6516293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3405645 
End bp3407135 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content55% 
IMG OID642748517 
Productputative sialic acid transporter 
Protein accessionYP_002116287 
Protein GI194737981 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00891] putative sialic acid transporter 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACTT CTACCCAGAA CATCCCGTGG TATCGCCATC TCAACCGGGC GCAGTGGCGG 
GCATTTTCCG CTGCCTGGCT GGGATATCTG CTTGATGGTT TTGATTTTGT GTTGATTGCT
CTTGTACTGA CTGAGGTACA AAGCGAATTT GGGCTGACGA CAGTACAGGC GGCAAGCCTG
ATTTCTGCGG CTTTTATCTC TCGCTGGTTC GGCGGGTTAT TACTGGGCGC GATGGGCGAT
CGCTATGGGC GTCGTCTGGC GATGGTCAGC AGCATCATCC TGTTTTCAGT GGGAACCCTG
GCCTGCGGGT TTGCGCCCGG TTACACCACC ATGTTCATCG CCCGACTGGT GATTGGTATG
GGCATGGCGG GCGAATATGG TTCCAGCGCG ACCTATGTGA TTGAAAGCTG GCCAAAACAT
TTACGCAATA AAGCCAGCGG TTTTCTGATT TCCGGCTTCT CCGTCGGCGC GGTCGTTGCC
GCGCAGGTGT ACAGCCTGGT GGTGCCTGTC TGGGGCTGGC GCGCGCTGTT TTTCATTGGC
ATTTTGCCAA TTATCTTCGC CCTCTGGCTG CGGAAAAACA TTCCGGAAGC GGAAGACTGG
AAAGAGAAAC ACGCGGGTAA AGCGCCGGTA CGTACGATGG TCGACATTCT TTATCGGGGC
GAACATCGCA TCATCAACAT TTTAATGACT TTCGCCGCCG CCGCTGCGCT GTGGTTCTGT
TTTGCCGGTA ACCTACAAAA TGCTGCGATT GTGGCGGGGC TGGGACTACT GTGCGCGGTT
ATCTTTATCA GCTTTATGGT GCAGAGCAGC GGTAAACGCT GGCCCACTGG CGTCATGCTG
ATGCTGGTGG TACTGTTTGC TTTCCTCTAT TCCTGGCCGA TTCAGGCGCT ATTACCTACT
TATCTGAAAA CCGAGCTGGC CTACGATCCG CATACGGTGG CGAATGTCCT GTTCTTTAGC
GGATTTGGCG CGGCGGTTGG TTGCTGCGTA GGCGGTTTTC TTGGCGACTG GCTGGGAACG
CGTAAAGCCT ATGTCTGTAG CCTGCTGGCC TCGCAAATCC TCATTATTCC GGTCTTTGCG
ATTGGCGGCA CAAACGTCTG GGTTCTGGGT CTGCTACTGT TTTTCCAACA GATGTTGGGG
CAGGGGATTG CCGGGATTCT GCCGAAACTG ATCGGCGGTT ACTTCGATAC CGATCAGCGC
GCGGCGGGGC TGGGCTTTAC TTATAACGTC GGCGCGCTCG GCGGCGCGCT GGCGCCGATC
CTGGGAGCGC TGATCGCTCA ACGTCTGGAT CTGGGCACTG CGCTAGCATC GCTCTCTTTC
AGCCTGACGT TTGTCGTGAT CCTGCTTATT GGGCTTGATA TGCCGTCTCG CGTACAGCGT
TGGCTACGTC CGGAAGCGTT ACGTACCCAC GATGCTATCG ACGACAAACC GTTCAGCGGA
GCCGTACCGC TTGGCAGTGG TAAAGGTGCC TTTGTAAAAA CGAAAAATTA A
 
Protein sequence
MSTSTQNIPW YRHLNRAQWR AFSAAWLGYL LDGFDFVLIA LVLTEVQSEF GLTTVQAASL 
ISAAFISRWF GGLLLGAMGD RYGRRLAMVS SIILFSVGTL ACGFAPGYTT MFIARLVIGM
GMAGEYGSSA TYVIESWPKH LRNKASGFLI SGFSVGAVVA AQVYSLVVPV WGWRALFFIG
ILPIIFALWL RKNIPEAEDW KEKHAGKAPV RTMVDILYRG EHRIINILMT FAAAAALWFC
FAGNLQNAAI VAGLGLLCAV IFISFMVQSS GKRWPTGVML MLVVLFAFLY SWPIQALLPT
YLKTELAYDP HTVANVLFFS GFGAAVGCCV GGFLGDWLGT RKAYVCSLLA SQILIIPVFA
IGGTNVWVLG LLLFFQQMLG QGIAGILPKL IGGYFDTDQR AAGLGFTYNV GALGGALAPI
LGALIAQRLD LGTALASLSF SLTFVVILLI GLDMPSRVQR WLRPEALRTH DAIDDKPFSG
AVPLGSGKGA FVKTKN