| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3527 |
|---|
| Symbol | |
|---|
| ID | 6517997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 3402211 |
|---|
| End bp | 3403491 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642748513 |
|---|
| Product | cytosine deaminase |
|---|
| Protein accession | YP_002116283 |
|---|
| Protein GI | 194737042 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAACA ATAACATCAC CATTCTTCAG GCGCGTCTGC AGGGACACGA AGGATTATGG
CAGATTACGA TTGAAAACGG GCGCTTTAGC CGGATTGAGC CTCAGGAAGC CGCATCGTTA
CCGCAGGGCG AAGTGCTTGA TGCCGAAGGC GGTCTGGCTA TTCCACCGTT TGTTGAGCCA
CATATCCACC TGGATACCAC GCAAACGGCG GGTGAACCGA GCTGGAACCA GTCCGGCACA
CTGTTTGAAG GGATTGAGCG CTGGGCAGAA CGTAAAGCAA TGCTCACGCA TGAAGATGTG
AAAGCGCGCG CGATGCAGAC CCTGAAATGG CAGATGGCTA ACGGCATCCA GTACGTTCGT
ACTCACGTTG ACGTTTCAGA TCCTACGCTC ACCGCGCTGA AAGCCATGCT GGAAGTGAAG
CAAGAGGTTG CGCCGTGGGT AGACCTACAA ATCGTCGCCT TTCCGCAAGA AGGTATTCTG
TCTTATCCCA ACGGTGAAGC GCTGTTAGAG GAAGCCGTGC GTTTGGGCGC TGACGTTATT
GGTGCCATTC CGCACTTTGA GTTCACGCGC GAATATGGCG TTGAATCGCT GCACAAAATC
TTTGCACTGG CGCAGAAATA CGATCGCTTG ATCGATGTGC ACTGCGACGA AATTGATGAC
GAGCAGTCTC GCTTTGTCGA AACGGTCGCG GCGCTGGCGC ATCGTGATGG CATGGGGGCG
CGCGTGACCG CCAGCCACAC CACGGCTATG CACTCGTACA ACGGCGCGTA TGCGTCACGC
CTGTTCCGCC TGTTGAAAAT GTCGGGGATT AACTTCGTCG CCAACCCGCT GGTGAATATT
CATCTGCAAG GGCGGTTTGA CACTTACCCG AAACGTCGTG GCGTCACGCG GGTGAAAGAG
ATGCTGGAAG CGGGGATCAA CGTCTGCTTT GGCCATGATG ACGTCTTCGA TCCGTGGTAT
CCATTAGGCA CGGCAAATAT GCTGCAGGTG CTGCATATGG GGTTACACGT TTGCCAGTTG
ATGGGGTATG GGCAAATCAA CGATGGGTTA AATCTGATCA CTACCCACAG CGCAAAAACC
CTGCATTTAC AGGACTACAG TCTGAGCGTC GGCAATGCCG CGAATCTGGT TATCTTACCC
GCTGAGAATG GATTCGATGC GGTACGTCGC CAGACGCCTG CCCGTTACTC GATTCGCCAC
GGGCGGGTAA TTGCCGAGAC GGTGCCGAGC CAGACGACGC TGCACCTGCC CCAGCCGGAA
GCCGTGACGT TTAAGCGTTA A
|
|---|
| Protein sequence | MQNNNITILQ ARLQGHEGLW QITIENGRFS RIEPQEAASL PQGEVLDAEG GLAIPPFVEP
HIHLDTTQTA GEPSWNQSGT LFEGIERWAE RKAMLTHEDV KARAMQTLKW QMANGIQYVR
THVDVSDPTL TALKAMLEVK QEVAPWVDLQ IVAFPQEGIL SYPNGEALLE EAVRLGADVI
GAIPHFEFTR EYGVESLHKI FALAQKYDRL IDVHCDEIDD EQSRFVETVA ALAHRDGMGA
RVTASHTTAM HSYNGAYASR LFRLLKMSGI NFVANPLVNI HLQGRFDTYP KRRGVTRVKE
MLEAGINVCF GHDDVFDPWY PLGTANMLQV LHMGLHVCQL MGYGQINDGL NLITTHSAKT
LHLQDYSLSV GNAANLVILP AENGFDAVRR QTPARYSIRH GRVIAETVPS QTTLHLPQPE
AVTFKR
|
|---|
| |