Gene SeSA_A3510 details

Gene Information

• Locus tag: SeSA_A3510
• Symbol: lptA
• ID: 6517592
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633
• Kingdom: Bacteria
• Replicon accession: NC_011094
• Strand: +
• Start bp: 3382208
• End bp: 3382762
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 642748498
• Product: lipopolysaccharide transport periplasmic protein LptA
• Protein accession: YP_002116268
• Protein GI: 194737776
• COG category: [S] Function unknown
• COG ID: [COG1934] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR03002] lipopolysaccharide transport periplasmic protein LptA

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAATTCA AAACAAACAA ACTCAGCCTT AATCTTATGC TTGCCGGCTC GCTGCTGGCC 
GCCAGCATTC CGGCTTTCGC CGTCACGGGC GATACCGAAC AGCCTATTCA TATTGACTCG 
GATCAACAGT CGCTGGATAT GCAAGGCAAC GTCGTGACCT TTACGGGCAA CGTGGTGATG 
ACCCAGGGCA CGATTAAGAT CAACGCCGAT AAAGTCGTGG TTACCCGCCC TGGCGGCGAA 
CAGGGGAAAG AGGTGATCGA CGGTTACGGC AATCCGGCCA CCTTCTACCA GATGCAGGAC 
AACGGTAAGC CGGTGAAAGG CCACGCTTCC CATATGCACT ACGAGCTGGC GAAAGATTTT 
GTGGTGCTAA CCGGCAACGC TTATCTGGAG CAGCTTGACA GCAACATTAC CGGCGACAAA 
ATCACCTACC TGGTGAAAGA GCAGAAAATG CAGGCCTTCA GCGAGAAAGG CAAACGCGTC 
ACCACCGTTC TGGTGCCGTC GCAGTTGCAA GACAAAAACA AAGGCCAGAC TCCGGCGCAA 
AAGAAGAGTA ACTAA 

 

Protein sequence

MKFKTNKLSL NLMLAGSLLA ASIPAFAVTG DTEQPIHIDS DQQSLDMQGN VVTFTGNVVM 
TQGTIKINAD KVVVTRPGGE QGKEVIDGYG NPATFYQMQD NGKPVKGHAS HMHYELAKDF 
VVLTGNAYLE QLDSNITGDK ITYLVKEQKM QAFSEKGKRV TTVLVPSQLQ DKNKGQTPAQ 
KKSN