Gene SeSA_A3497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3497 
SymbolispB 
ID6516996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3372338 
End bp3373450 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content53% 
IMG OID642748485 
Productoctaprenyl diphosphate synthase 
Protein accessionYP_002116255 
Protein GI194736065 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000502837 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA AAAACACAAC GCATACGGTA ACGTTTATCT GCGGCGTTTT TTCAGTACAA 
TCAGGGTATA TTTCTAACCA TAAACCCTAC GTTACCTCAT TCAGACATGG GATAATCGGG 
GCGATAAGCC CGGCTTTTGC GATGAATTTA GAAAAAATCA ACGAGTTAAC CGCGCAAGAT 
ATGGCGGGTG TCAATGCGAC AATCCTTGAA CAGCTTAATT CCGACGTTCA ACTGATTAAT 
CAGCTAGGAT ATTACATTAT TAGCGGCGGC GGGAAACGCA TTCGTCCGAT GATTGCCGTT 
CTTGCCGCGC GTGCGGTGGG TTATCAGGGT AACGCGCACG TGACTATCGC CGCTCTGATC 
GAGTTTATCC ACACGGCGAC GCTGCTGCAT GATGATGTGG TGGATGAATC CGATATGCGT 
CGCGGCAAGG CAACGGCAAA TGCCGCCTTC GGTAATGCCG CCAGCGTGCT GGTCGGCGAC 
TTTATCTATA CCCGCGCCTT CCAGATGATG ACCAGCCTCG GCTCGTTAAA AGTGCTGGAA 
GTGATGTCGG AAGCGGTCAA CGTGATTGCA GAAGGCGAAG TGCTGCAATT GATGAACGTG 
AATGACCCGG ACATTACCGA AGAAAATTAC ATGCGGGTGA TTTACAGTAA AACGGCCCGT 
CTGTTCGAAG CCGCCGCCCA GTGCTCCGGT ATTCTTGCCG GTTGTACGCC TGAGCAAGAG 
AAAGGGTTGC AGGACTATGG CCGCTACCTT GGTACGGCTT TCCAGCTCAT TGACGATCTG 
CTGGATTACA GCGCCGACGG CGAGCATCTC GGTAAAAATG TGGGTGATGA CCTCAATGAG 
GGCAAACCCA CCTTACCGTT GCTTCACGCC ATGCGCCACG GTACGCCAGA ACAGTCAGCG 
ATGATCCGTA CCGCTATTGA ACAAGGTAAT GGCCGTCATC TTCTGGAACC GGTTCTGGAA 
GCGATGACCA CCTGCGGCTC GCTGGAATGG ACGCGTCAGC GAGCGGAAGA AGAAGCCGAC 
AAAGCGATAT CCGCGTTGCA GATATTGCCG GATACTCCAT GGCGTGAGGC GCTTATCGGT 
CTCGCACACA TCGCGGTGCA GCGCGATCGT TAA
 
Protein sequence
MKKKNTTHTV TFICGVFSVQ SGYISNHKPY VTSFRHGIIG AISPAFAMNL EKINELTAQD 
MAGVNATILE QLNSDVQLIN QLGYYIISGG GKRIRPMIAV LAARAVGYQG NAHVTIAALI 
EFIHTATLLH DDVVDESDMR RGKATANAAF GNAASVLVGD FIYTRAFQMM TSLGSLKVLE 
VMSEAVNVIA EGEVLQLMNV NDPDITEENY MRVIYSKTAR LFEAAAQCSG ILAGCTPEQE 
KGLQDYGRYL GTAFQLIDDL LDYSADGEHL GKNVGDDLNE GKPTLPLLHA MRHGTPEQSA 
MIRTAIEQGN GRHLLEPVLE AMTTCGSLEW TRQRAEEEAD KAISALQILP DTPWREALIG 
LAHIAVQRDR