Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3491 |
Symbol | dacB |
ID | 6515721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 3367786 |
End bp | 3369219 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642748479 |
Product | D-alanyl-D-alanine carboxypeptidase/endopeptidase |
Protein accession | YP_002116249 |
Protein GI | 194734972 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTTT CCAGATTTAT CATCGGATTG ACCACCAGTA TAGCGTTCAG CGTTCAGGCC GCGAATATTG ACGAATACAT CAAACAGCTT CCGGCCGGCG CCAACCTCGC GCTGATGGTG CAAAAGATTG GCGCGCCCGC GCCAGCTATT GATTATCATA GTCAGCAGAT GGCGCTTCCC GCCAGTACCC AAAAGGTGAT TACCGCGCTG GCGGCGCTGA TTCAACTCGG CCCGGATTTC CGTTTTACGA CCACGCTGGA GACTAAAGGC AACGTCGATA ACGGCATCCT GAAAGGTGAC GTAATTGCGC GATTCGGTGG CGATCCAACG CTAAGACGTC AGGATATTCG CAATATGGTC GCGACGTTGA AAAAGTCAGG CGTCACGCAA ATCGACGGCA ATGTGCTTAT CGACACGTCG ATTTTCGCCA GCCACGATAA AGCGCCAGGC TGGCCGTGGA ACGACCTGAC GCAGTGTTTC AGCGCGCCTC CCGCCGCCGC CATTGTTGAC CGCAACTGTT TTTCTGTGTC GCTTTATAGC GCGCAAAAAC CAAACGATTT AGCTTTTATT CGCGTGGCCT CTTATTATCC GGTAACGATG TTCAGCCAGG TACGGACTCT GCCGCGCGGT TCGGCAGACG CGCAGTATTG CGAGCTGGAT GTTGTGCCTG GCGATTTGAA CCGTTATACG CTTACCGGCT GTTTACCACA GCGCGCCGAC CCGCTGCCGC TGGCCTTTGC TATTCAGGAC GGCGCCAGCT ACGCGGGCGC GATCCTCAAG CAGGAACTGA AAGAGGCCGG GATAACTTAC CGCGGCACAC TGCTGCGCCA GACGCAGGTT AACGAGCCCG GAACGATCGT CGCCAGTAAA CAGTCGGCGC CACTGCACGA TCTGCTTAAG ATTATGCTGA AAAAGTCAGA CAACATGATC GCCGATACTG TTTTTCGGAT GATTGGTCAT GTCAGGTTTA ACGTGCCTGG CACCTGGCGG GCGGGATCGG ATGCCGTTCG CCAGATCCTG CGCCAACAGG CGGGAATTGA TATCGGCAAT ACCATTATTG CCGACGGTTC CGGTCTTTCT CGCCATAACC TGATCGCTCC CGCCACGATG ATGCAGGTGC TGCAATATAT CGCCCAACAC GATAACGAGC TGAACTTTAT CTCTATGCTG CCGCTGGCGG GCTATGATGG TTCATTGCAA TACCGCGCCG GACTGCATCA GGCGGGCGTA GACGGTAAGG TTTCGGCGAA AACTGGGTCA CTGCAGGGCG TGTATAATCT GGCGGGCTTT ATTACCACCG CAAGCGGGCA ACGGATGGCA TTTGTACAGT ATTTGTCGGG CTACGCGGTT CCACCTGCCG ATCAGCGTAA TCGGCGTATT CCGCTGGTAC GCTTCGAGAG TCGGTTGTAC AAGGATATTT ATCAGAATAA CTGA
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Protein sequence | MRFSRFIIGL TTSIAFSVQA ANIDEYIKQL PAGANLALMV QKIGAPAPAI DYHSQQMALP ASTQKVITAL AALIQLGPDF RFTTTLETKG NVDNGILKGD VIARFGGDPT LRRQDIRNMV ATLKKSGVTQ IDGNVLIDTS IFASHDKAPG WPWNDLTQCF SAPPAAAIVD RNCFSVSLYS AQKPNDLAFI RVASYYPVTM FSQVRTLPRG SADAQYCELD VVPGDLNRYT LTGCLPQRAD PLPLAFAIQD GASYAGAILK QELKEAGITY RGTLLRQTQV NEPGTIVASK QSAPLHDLLK IMLKKSDNMI ADTVFRMIGH VRFNVPGTWR AGSDAVRQIL RQQAGIDIGN TIIADGSGLS RHNLIAPATM MQVLQYIAQH DNELNFISML PLAGYDGSLQ YRAGLHQAGV DGKVSAKTGS LQGVYNLAGF ITTASGQRMA FVQYLSGYAV PPADQRNRRI PLVRFESRLY KDIYQNN
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