Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3477 |
Symbol | nusA |
ID | 6518152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 3356729 |
End bp | 3358231 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642748465 |
Product | transcription elongation factor NusA |
Protein accession | YP_002116237 |
Protein GI | 194733934 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAAG AAATTTTGGC TGTTGTTGAA GCCGTCTCCA ACGAAAAAGC GCTGCCACGC GAAAAAATTT TTGAAGCGCT GGAAAGTGCG CTGGCGACAG CAACAAAGAA AAAATATGAG CAGGAGATCG ATGTTCGTGT AGAAATCGAT CGTAAAAGCG GTGATTTTGA TACTTTCCGC CGTTGGTTGA TCGTTGAAGA AGTGACCATG CCGACGAAGG AAATTACGCT GGAAGCGGCG CGCTTTGAAG ACGAAAGTCT GAATGTCGGC GACTATGTTG AAGATCAGAT TGAATCTGTC ACCTTTGACC GTATCACCAC GCAGACTGCG AAACAGGTTA TCGTGCAGAA AGTGCGTGAA GCCGAACGGG CGATGGTTGT CGATCAGTTC CGCGACCAGG AAGGCGAAAT CGTCACTGGC GTGGTGAAGA AAGTAAACCG CGACAATATC TCTCTGGAAA TTAAATCTGA AGGGATGGCC GGTAACGCTG AAGCGGTGAT TCTGCGTGAA GATATGCTGC CGCGCGAAAA CTTCCGTCCT GGCGACCGTA TTCGCGGCGT GCTGTATGCT GTTCGCCCGG AAGCGCGTGG CGCGCAGCTG TTCGTCACCC GTTCCAAGCC GGAAATGCTG ATCGAACTGT TCCGCATCGA AGTGCCGGAA ATCGGCGAAG AAGTGATTGA AATTAAAGCG GCGGCTCGCG ATCCGGGTTC TCGTGCGAAA ATCGCAGTGA AAACCAACGA TAAACGTATC GATCCGGTCG GCGCTTGCGT GGGGATGCGC GGCGCGCGCG TTCAGGCGGT CTCTACCGAA CTGGGCGGTG AGCGTATCGA TATCGTGCTG TGGGATGATA ACCCGGCGCA GTTCGTCATT AATGCGATGG CGCCGGCAGA CGTCGCGTCT ATCGTGGTGG ACGAAGATAA ACATACCATG GATATCGCCG TTGAAGCCGG TAATCTGGCG CAGGCGATCG GACGTAATGG TCAGAACGTC CGCCTGGCTT CGCAATTGAG CGGCTGGGAA CTCAACGTAA TGACCGTTGA TGACTTGCAG GCTAAACATC AGGCTGAAGC ACATGCCGCT ATCGAGATCT TTACTAAATA TCTTGATATT GATGAAGAGT TCGCGACCGT TCTGGTAGAA GAAGGTTTCT CCACGCTCGA AGAACTGGCC TATGTGCCAA TGAAAGAACT GCTGGAAATT GACGGCCTTG ATGAGCCGAC CGTTGAAGCA CTGCGCGAGC GTGCTAAAAA CGCACTGACC ACTCTGGCGC AGGACCAGGA AGCAAGCCTC GGTGATAACA AACCGGCTGA CGATCTGCTG AATCTGGAAG GATTAGATCG CGATATGGCT TTCAAACTGG CGGCTCGTGG TGTTTGTACG CTGGAAGATC TCGCCGACCA GGGCATTGAT GATCTGGCTG ATATCGAAGG GTTGACCGAC GAAAAAGCCG GTGAGCTGAT TATGGCTGCC CGTAATATTT GCTGGTTCGG CGACGAAGCG TAA
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Protein sequence | MNKEILAVVE AVSNEKALPR EKIFEALESA LATATKKKYE QEIDVRVEID RKSGDFDTFR RWLIVEEVTM PTKEITLEAA RFEDESLNVG DYVEDQIESV TFDRITTQTA KQVIVQKVRE AERAMVVDQF RDQEGEIVTG VVKKVNRDNI SLEIKSEGMA GNAEAVILRE DMLPRENFRP GDRIRGVLYA VRPEARGAQL FVTRSKPEML IELFRIEVPE IGEEVIEIKA AARDPGSRAK IAVKTNDKRI DPVGACVGMR GARVQAVSTE LGGERIDIVL WDDNPAQFVI NAMAPADVAS IVVDEDKHTM DIAVEAGNLA QAIGRNGQNV RLASQLSGWE LNVMTVDDLQ AKHQAEAHAA IEIFTKYLDI DEEFATVLVE EGFSTLEELA YVPMKELLEI DGLDEPTVEA LRERAKNALT TLAQDQEASL GDNKPADDLL NLEGLDRDMA FKLAARGVCT LEDLADQGID DLADIEGLTD EKAGELIMAA RNICWFGDEA
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