| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3473 |
|---|
| Symbol | truB |
|---|
| ID | 6518752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3352529 |
|---|
| End bp | 3353473 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642748461 |
|---|
| Product | tRNA pseudouridine synthase B |
|---|
| Protein accession | YP_002116233 |
|---|
| Protein GI | 194738144 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0130] Pseudouridine synthase |
|---|
| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGTC CTCGTCGTCG TGGCCGCGAC ATTCACGGCG TTCTGCTGCT GGATAAGCCG
CAGGGTATGT CCAGCAATGA CGTGCTGCAG AAAGTTAAGC GCATCTACAA TGCCAACCGC
GCCGGGCATA CCGGCGCGCT GGACCCGCTG GCGACCGGCA TGTTGCCGAT TTGCCTCGGC
GAAGCGACAA AATTTTCGCA GTACCTGCTG GATTCTGACA AACGCTATCG TGTTATTGCC
CGTCTGGGGC AGCGCACGGA TACCTCTGAC GCCGATGGTC AAATCGTGCA GGAGCGTCCG
GTGACTTTCA GCGCTGAGCA GCTTGCGAGC GCGCTGGAGA CCTTTCGTGG GGATATCGAA
CAGATTCCCT CGATGTATTC GGCGCTGAAG TATCAGGGCA AGAAGCTGTA CGAATATGCC
CGCCAGGGTA TCGAAGTGCC GCGCGAAGCC CGCCCGATTA CCGTCTATGA GCTGCTGTTT
ATTCGCCATG AAGGTAACGA GCTGGAGCTG GAAGTTCATT GCTCCAAAGG CACCTATATT
CGTACCATTA TTGATGATTT AGGTGAGAAA CTGGGCTGTG GCGCGCACGT AACGTTCCTG
CGTCGTCTGA CGGTCAGCAA GTATCCGATT GAGCGAATGG TCACGCTGGA GCAATTGCGC
GAGCTGGTAG CACAGGCGGA ACAGCAGGGC GTTCCGGCGG CGCAGTTGCT CGATCCATTA
TTGATGCCAA TGGACAGTCC AGCTTCGGAC TATCCTGTTG TTAATTTGCC GTTAACATCT
TCGGTATACT TCAAAAATGG CAACCCGGTT CGTACCACGG GCGCGCCGTT GAAGGGACTG
GTTCGTGTGA CGGAAGGCGA AGACGGTAAA TTTATCGGTA TGGGCGAAAT TGACGACGAA
GGCCGTGTCG CGCCTCGTCG GCTGGTAGTA GAGTACCCAG CGTAA
|
|---|
| Protein sequence | MSRPRRRGRD IHGVLLLDKP QGMSSNDVLQ KVKRIYNANR AGHTGALDPL ATGMLPICLG
EATKFSQYLL DSDKRYRVIA RLGQRTDTSD ADGQIVQERP VTFSAEQLAS ALETFRGDIE
QIPSMYSALK YQGKKLYEYA RQGIEVPREA RPITVYELLF IRHEGNELEL EVHCSKGTYI
RTIIDDLGEK LGCGAHVTFL RRLTVSKYPI ERMVTLEQLR ELVAQAEQQG VPAAQLLDPL
LMPMDSPASD YPVVNLPLTS SVYFKNGNPV RTTGAPLKGL VRVTEGEDGK FIGMGEIDDE
GRVAPRRLVV EYPA
|
|---|
| |