| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3466 |
|---|
| Symbol | mtr |
|---|
| ID | 6518658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3345272 |
|---|
| End bp | 3346516 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642748457 |
|---|
| Product | tryptophan permease |
|---|
| Protein accession | YP_002116229 |
|---|
| Protein GI | 194735590 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0814] Amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACAC TTACCACCAC CCAAACGTCA CCTTCGCTGC TTGGCGGCGT GGTGATTATC
GGCGGCACCA TCATTGGCGC GGGGATGTTC TCCCTGCCGG TGGTCATGTC CGGGGCGTGG
TTCTTCTGGT CGATGGCGGC GCTGGTCTTT ACCTGGTTTT GTATGCTGCA CTCCGGGCTA
ATGATCCTCG AAGCCAACCT TAACTACCGC ATTGGTTCGA GTTTCGACAC CATCACCAAA
GATCTGTTGG GGAAAGGCTG GAACATTGTC AACGGCATCT CTATTGCCTT TGTGCTCTAC
ATCCTGACTT ACGCCTATAT CTCGGCGAGC GGCTCAATTC TGCATCATAC CTTTGCTGAG
ATGTCGCTGA ACGTTCCGGC GCGAGCGGCA GGTTTTGCCT TTGCGCTGCT GGTGGCGTTT
GTCGTGTGGC TGAGTACGAA GGCGGTCAGT CGGATGACGG CGATTGTGCT GGGCGCGAAA
GTGATTACTT TCTTCCTGAC CTTCGGCAGC CTGTTAGGAC ACGTTCAGCC TGCCACGTTG
TTTAACGTGG CTGAAAGCCA CGCGTCATAT ACGCCGTACC TGCTGATGAC GCTGCCATTT
TGTCTGGCCT CTTTTGGTTA TCACGGTAAC GTACCGAGCC TGATGAAATA TTACGGCAAA
GATCCGCGCA CCATCGTGAA ATGCCTGATT TATGGAACGT TACTGGCGCT GGCGCTCTAT
TCCGTCTGGC TGCTGGGGAC GATGGGCAAC ATCCCGCGTC CAGAATTTAT CGGCATTGCA
CAGAAAGGCG GCAATATTGA TGTGCTGGTA CAGGCGTTAA GCGGCGTGCT GAACAGCCGC
AGCCTGGATC TGCTGCTGGT GGTGTTCTCT AACTTTGCGG TCGCCAGTTC CTTCCTCGGC
GTGACGCTGG GGCTGTTTGA CTATCTGGCG GATCTGTTTG GTTTTGATGA CTCGGCAATG
GGGCGTTTTA AAACCGCACT GCTGACGTTT GTGCCGCCAA TTGTCGGTGG CCTGCTGTGG
CCGAACGGTT TTCTGTACGC CATTGGCTAT GCAGGTTTAG CTGCAACTAT CTGGGCGGCC
ATTGTGCCTG CGCTGTTAGC ACGTAAATCT CGCGAACGTT TCGGCAGCCC GAAATTCCGC
GTCTGGGGCG GCACGCCGAT GATTGTACTG ATTCTGGTCT TCGGTGTCGG CAACGCGGTT
ATCCATATTC TGTCGAGCTT TAATTTGCTG CCGGTGTACC AGTAA
|
|---|
| Protein sequence | MATLTTTQTS PSLLGGVVII GGTIIGAGMF SLPVVMSGAW FFWSMAALVF TWFCMLHSGL
MILEANLNYR IGSSFDTITK DLLGKGWNIV NGISIAFVLY ILTYAYISAS GSILHHTFAE
MSLNVPARAA GFAFALLVAF VVWLSTKAVS RMTAIVLGAK VITFFLTFGS LLGHVQPATL
FNVAESHASY TPYLLMTLPF CLASFGYHGN VPSLMKYYGK DPRTIVKCLI YGTLLALALY
SVWLLGTMGN IPRPEFIGIA QKGGNIDVLV QALSGVLNSR SLDLLLVVFS NFAVASSFLG
VTLGLFDYLA DLFGFDDSAM GRFKTALLTF VPPIVGGLLW PNGFLYAIGY AGLAATIWAA
IVPALLARKS RERFGSPKFR VWGGTPMIVL ILVFGVGNAV IHILSSFNLL PVYQ
|
|---|
| |