Gene SeSA_A3447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3447 
Symbol 
ID6517971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3329957 
End bp3330421 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content54% 
IMG OID642748438 
ProductPTS system galactitol-specific transporter subunit IIA 
Protein accessionYP_002116210 
Protein GI194735771 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.487344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAC TATTTGTCCG AACCGGAATC ACATTCGACT CGAGCCAACA GGCGCTGGCG 
CACATTGGCA AAGAGATGCT GGCGAAAGGC GTGGTACATG ATAGTTATCC GCAGGCGCTG
GTGGAACGTG AAGCGTCTTT TCCTACCGGC ATTGCGCTGG AGCGTCACGC CGTCGCTATC
CCTCATTGCG AGGCGGTTCA TGCGAAATCA CCCGCTATCT ATCTGATTCG TCCAGATAAG
CCGGTCATGT TTCAACAGGC GGATGATGAC GAAGAGATTG CCGTTTCGTT AATCATCGCC
TTAATCGTTG AAAACCCGGC GGCACAGCTA AAACTTCTGC GCCGCCTGTT TAGTGAGCTA
CAGAACCCAA GCACCCTCGA TGCCCTGTTA AGCGCGCCGG ATGCCGAACT GGCGATACGC
TTTCAGGAAA CCATCCTTGA GCCTGAGCAG TGCGCCCAGG TTTGA
 
Protein sequence
MSQLFVRTGI TFDSSQQALA HIGKEMLAKG VVHDSYPQAL VEREASFPTG IALERHAVAI 
PHCEAVHAKS PAIYLIRPDK PVMFQQADDD EEIAVSLIIA LIVENPAAQL KLLRRLFSEL
QNPSTLDALL SAPDAELAIR FQETILEPEQ CAQV