Gene SeSA_A3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3411 
Symbol 
ID6517120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3295881 
End bp3297017 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content54% 
IMG OID642748405 
Productmethyltransferase family protein 
Protein accessionYP_002116177 
Protein GI194735079 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACG TAGACGACGG TTTCCGTTCA CTGACGCTGA AACGTTTTCC GCAAACGGAT 
GATGTTAACC CGCTTCTGGC GTGGGAGGCG GCCGATGAGT ATCTGCTGCA ACAGTTGGAT 
GAGACGGAAA TTCGCGGCCC GGTGCTGATC CTGAATGATA CGTTTGGCGC GCTAAGCTGT 
GCGCTGGCGG AGCATTCGCC ATACAGTATT GGCGATTCGT ATTTAAGCGA ACTGGGTACG 
CGAGAGAATT TACGCCATAA CGGCATCGCG GAGTCCAGCG TAACGTTTCT CGACAGTACC 
GCTGACTACC CGCAGGCGCC GGGCGTGGTA TTGATTAAGG TACCGAAAAC ACTGGCGTTG 
CTGGAACAGC AGTTACGCGC TTTGCGTAAG GTCGTTACGG CGCAAACGCG TATTATCGCC 
GGCGCGAAAG CGCGTGATAT TCATACCTCT ACGCTGGAAC TGTTTGAAAA AGTGCTGGGC 
CCAACCACGA CGACGCTGGC GTGGAAGAAA GCGCGCCTGA TTAACTGTAC CTTCAGTCAT 
CCGCAACTGG CCGACGCGCC GCAAACGCTA AGCTGGAAAC TGGAAGATAC AGGCTGGACG 
ATTCACAACC ACGCGAATGT GTTTTCTCGT ACCGGATTGG ATATCGGCGC GCGCTTCTTT 
ATGCAGCATT TGCCGGAAAA CCTCGACGGG GAGATTGTCG ATCTCGGCTG CGGCAATGGG 
GTGATTGGCC TGAGCTTACT GGCGAAAAAT CCGCAGGCGA ACGTGGTATT TGTCGATGAA 
TCGCCGATGG CGGTAGATTC CAGCCGTTTG AATGTAGAAA CGAACCTGCC GGAAGCGTTC 
GAACGCTGCG AATTTATGAT CAACAATGCG CTCTCCGGCG TGGAGCCGTT CCGTTTTAAC 
GCTGTGTTCT GCAACCCGCC GTTCCACCAG AAACATGCGC TGACGGATAA TATCGCCTGG 
GAGATGTTCC ATCACGCCCG CCGTTGCCTG AAAATCAACG GCGAACTGTA TATTGTGGCG 
AACCGCCATC TGGACTATTT CCACAAGCTG AAGAAGATTT TCGGTAATTG CGCGACGATA 
GCAACCAACA ATAAATTTGT TATTTTGAAA GCGGTGAAGC AGGGGCGCCG TCGATAA
 
Protein sequence
MSHVDDGFRS LTLKRFPQTD DVNPLLAWEA ADEYLLQQLD ETEIRGPVLI LNDTFGALSC 
ALAEHSPYSI GDSYLSELGT RENLRHNGIA ESSVTFLDST ADYPQAPGVV LIKVPKTLAL 
LEQQLRALRK VVTAQTRIIA GAKARDIHTS TLELFEKVLG PTTTTLAWKK ARLINCTFSH 
PQLADAPQTL SWKLEDTGWT IHNHANVFSR TGLDIGARFF MQHLPENLDG EIVDLGCGNG 
VIGLSLLAKN PQANVVFVDE SPMAVDSSRL NVETNLPEAF ERCEFMINNA LSGVEPFRFN 
AVFCNPPFHQ KHALTDNIAW EMFHHARRCL KINGELYIVA NRHLDYFHKL KKIFGNCATI 
ATNNKFVILK AVKQGRRR