Gene SeSA_A3405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3405 
Symbol 
ID6518832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3287686 
End bp3288330 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content54% 
IMG OID642748399 
Producttranscriptional regulator, PadR family 
Protein accessionYP_002116171 
Protein GI194736657 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAATC AACATGAAGG GTGTTGCAAA AACCGGGATC ATAAGCACGA TGGTTGCTGC 
AAAGATCGCG AACATCAGCA TGAAGGCTGC CATAGCGCGC ATCAGCATGA GAACGCCAGT 
TGCGGCGGCG AACACCGTCA CGGACACGGC TGTGGTCGTC ATGGACAGGG CGGTGGTCGA 
CGCCAGCGAT TTTTTGGCCA CGGGGAACTT CGGCTGGTCA TTCTTGATAT CCTGACCCGG 
GACGCCAGCC ACGGCTATGA ACTGATTAAA GCGATAGAAA ACCTAACGGG GGGCGGCTAT 
ACGCCAAGCG CTGGCGTGAT CTACCCTACG CTGGATTTTT TACAGGATCA GCAATTTATC 
ACGATTAGCG ACGAAGAAGG CGGGCGGAAA AAAATCGCGA TTACCGCGAA CGGCGCGCAA 
TGGCTTGATG AAAATCGCGA ACACCTGACG CATATTCAGG CGCGGCTAAA AGCCCGTTGT 
GTGGGCATGG AGTTACGTAA AAATCCGCAG ATGAAGCGGG CGCTGGATAA CTTCAAGGCC 
GTGCTGGATC TGCGGATAAA CCACAGCGAT ATCAACGACG CGCAAATCAA ACGCATTATC 
GGCGTGATTG ATCGCGCGGC GCTGGAAATC GCCGAACTGG ATTAA
 
Protein sequence
MQNQHEGCCK NRDHKHDGCC KDREHQHEGC HSAHQHENAS CGGEHRHGHG CGRHGQGGGR 
RQRFFGHGEL RLVILDILTR DASHGYELIK AIENLTGGGY TPSAGVIYPT LDFLQDQQFI 
TISDEEGGRK KIAITANGAQ WLDENREHLT HIQARLKARC VGMELRKNPQ MKRALDNFKA 
VLDLRINHSD INDAQIKRII GVIDRAALEI AELD