Gene SeSA_A3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3388 
Symbol 
ID6516597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3267969 
End bp3269648 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content54% 
IMG OID642748383 
Productinner membrane protein YqiK 
Protein accessionYP_002116156 
Protein GI194735417 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATG TTTTTGGCAT ATTGCCATCA TGGATGTTTA CCGCCATCGT TGCGGTTATC 
GTCTTACTAA TTATCGGGAT CATTTTTGCT CGCCTCTATC GCCGCGCATC TGCGGAACAG
GCGTTTGTCC GTACCGGGCT TGGCGGGCAA AAAGTGGTGA TGAGCGGCGG CGCTATTGTG
ATGCCAATCT TTCACGAAAT TATTCCGATC AATATGAATA CCCTAAAACT TGAAGTCAGC
CGTGCTACCG TCGACAGTCT GATCACCAAA GATCGTATGC GCGTTGACGT GGTCGTTGCT
TTCTTCGTGC GTGTAAAACC CTCTGTTGAA GGTATTGCCA CCGCCGCACA AACGCTTGGT
CAGCGAACTC TGTCGCCGGA AGATCTGCGT ATGCTGGTTG AGGATAAATT CGTTGACGCC
TTACGCGCTA CCGCAGCCCA GATGACGATG CATGAGCTAC AGGACACGCG TGAAAACTTC
GTTCAGGGCG TACAAAACAC CGTTGCGGAA GATTTGTCGA AAAACGGCCT GGAGCTGGAA
AGCGTCTCAT TAACCAACTT TAACCAAACG TCCAAAGAGC ATTTCAATCC AAACAACGCC
TTTGATGCCG AAGGGCTGAC GAAACTGACG CAGGAAACCG AACGCCGCCG TCGTGAACGT
AATGAAGTGG AACAGGATGT GGAAGTGGCG GTGCGCGAAA AGAACCGCGA CGCGCTTGAG
CGCAAGCTGG AAATCGAGCA GCAAGAAGCC TTTATGACTC TGGAGCAGGA GCAACAGGTT
AAAACCCGCA CCGCCGAACA AAACGCCAAA ATTGCCGCTT TTGAGGCCGA GTGCCATCGT
GAAGCAGAAC AGACGCGCAT ACTTGCTGAG CGGCAGATCC AGGAGACGGA GATCGAACGT
GAGCAAGCAG TACGGTCCAG GAAAGTTGAG GCCGAGCGTG AAGTACGTAT TAAAGAGATC
GAACAGCAAC AGGTGACAGA AATCGCCAAC CAGACGAAAT CTATCGCCAT TGCCGCCAAA
TCCGAGCAGC AATCGCAAGC GGAAGCGCGC GCCAACGACG CGCTGGCCGA TGCGGTTCGC
GCCCAGCAAA ACGTAGAAAC CACCCGCCAG ACCGCCGAAG CGGATCGCGC CAAGCAGGTC
GCTCTGATCG CCGCGGCACA GGATGCGGAA ACCAAAGCGG TCGAACTGAC CGTTCGGGCA
AAAGCAGAGA AAGAAGCGGC AGAATTGCAA GCCGCCGCCA TCATCGAACT GGCGGAAGCA
ACGCGTAAAA AAGGTTTGGC GGAAGCCGAA GCACAACGGG CGCTGAATGA CGCTATCAAC
GTGCTTTCTG ACGAACAAAC CAGCCTCAAA TTTAAACTAG CGCTCCTACA ATCGTTGCCT
GCTGTTATTG AGAAGTCTGT TGAACCGATG AAATCCATCG ACGGCATTAA GATTATTCAG
GTCGATGGCC TCAATCGCGG CACTACGGCG GGCGACGTCG CCGCTGGCGG CGCTAACGGG
GGAAACCTGG CAGAACAAGC GTTATCTGCC GCGCTCACCT ATCGTACCCA GGCGCCGCTG
ATCGATTCGC TGTTAAACGA GATTGGCATC GCCGGCGGCT CGCTAAAGGC GCTGACCACG
CCGTTGGTTT CATCGACAAC GGATGAGATT AATCGCGAAG CAACGGTAAA AGAGCAATAA
 
Protein sequence
MDDVFGILPS WMFTAIVAVI VLLIIGIIFA RLYRRASAEQ AFVRTGLGGQ KVVMSGGAIV 
MPIFHEIIPI NMNTLKLEVS RATVDSLITK DRMRVDVVVA FFVRVKPSVE GIATAAQTLG
QRTLSPEDLR MLVEDKFVDA LRATAAQMTM HELQDTRENF VQGVQNTVAE DLSKNGLELE
SVSLTNFNQT SKEHFNPNNA FDAEGLTKLT QETERRRRER NEVEQDVEVA VREKNRDALE
RKLEIEQQEA FMTLEQEQQV KTRTAEQNAK IAAFEAECHR EAEQTRILAE RQIQETEIER
EQAVRSRKVE AEREVRIKEI EQQQVTEIAN QTKSIAIAAK SEQQSQAEAR ANDALADAVR
AQQNVETTRQ TAEADRAKQV ALIAAAQDAE TKAVELTVRA KAEKEAAELQ AAAIIELAEA
TRKKGLAEAE AQRALNDAIN VLSDEQTSLK FKLALLQSLP AVIEKSVEPM KSIDGIKIIQ
VDGLNRGTTA GDVAAGGANG GNLAEQALSA ALTYRTQAPL IDSLLNEIGI AGGSLKALTT
PLVSSTTDEI NREATVKEQ