Gene SeSA_A3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3375 
Symbol 
ID6515455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3258393 
End bp3259181 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content57% 
IMG OID642748371 
Producthypothetical protein 
Protein accessionYP_002116144 
Protein GI194734625 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.62567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTAA CGTGTATGCC AGCATTGTTT TTGGGGCATG GCAGCCCGAT GAACGTGCTG 
GACGATAACG ATTATACCCG CGCCTGGCGG CGATTGGGGG AAGCCCTGCC TCGACCACAG 
GCGATAGTGG TGGTGTCGGC GCACTGGTAT ACCCGCGGGA CGGGCGTCAC AGCGATGGAA 
AGGCCGCAAA CTCTCCATGA TTTTGGCGGT TTTCCGCAGG CGCTGTATGA CACGCATTAT 
CCGGCCCCTG GATCGCCTGC GCTGGCGCAG CGTTTGGTTG AACTGTTGGC TCCCGTTCCC 
GTCGCGCTCG ATAAAGAAGC GTGGGGATTT GATCACGGCT CCTGGGGCGT ATTGATCAAG 
ATGTACCCGA ATGCGGATAT CCCGATGGTG CAGCTTAGTG TTGATAGTAC CAAACCGGCG 
GCATGGCATT TTGAGGTGGG TCGTAAGCTG GCGACGCTGC GTGACGAAGG CGTGATGCTG 
GTGGCCAGCG GGAATGTGGT TCATAACCTG CGGACTGTGC GTTGGCACGG TGACAATATA 
CCGTATCCCT GGGCGGCGTC ATTTAATGAC TTTGTTAAAG CCAATCTGAC GTGGCAGGGG 
CCGGTAGAAC AGCACCCGCT GGTGAATTAT CTGCAACATG AAGGGGGGGT CTTATCGAAC 
CCGACGCCGG AGCACTTTTT ACCTTTGCTA TATGTACTTG GCGCCTGGGA CGGCAAGGAA 
CCTATCACCA TCCCGGTCGA CGGTATTGAG ATGGGCAGTA TAAGTATGTT GTCGGTGCAG 
GTGGGGTAG
 
Protein sequence
MSLTCMPALF LGHGSPMNVL DDNDYTRAWR RLGEALPRPQ AIVVVSAHWY TRGTGVTAME 
RPQTLHDFGG FPQALYDTHY PAPGSPALAQ RLVELLAPVP VALDKEAWGF DHGSWGVLIK 
MYPNADIPMV QLSVDSTKPA AWHFEVGRKL ATLRDEGVML VASGNVVHNL RTVRWHGDNI 
PYPWAASFND FVKANLTWQG PVEQHPLVNY LQHEGGVLSN PTPEHFLPLL YVLGAWDGKE 
PITIPVDGIE MGSISMLSVQ VG