Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3360 |
Symbol | parC |
ID | 6518018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 3244102 |
End bp | 3246360 |
Gene Length | 2259 bp |
Protein Length | 752 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642748356 |
Product | DNA topoisomerase IV subunit A |
Protein accession | YP_002116129 |
Protein GI | 194735135 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.384916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.452559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGATA TGGCAGAGCG CCTTGCGCTA CATGAATTTA CGGAAAACGC CTACTTAAAC TACTCCATGT ACGTGATCAT GGATCGTGCG TTGCCGTTTA TTGGCGACGG CCTGAAGCCG GTACAGCGTC GCATCGTCTA TGCGATGTCA GAGCTGGGGC TGAACGCCAG CGCTAAATTT AAAAAATCCG CCCGTACCGT CGGTGACGTA CTGGGTAAGT ATCATCCGCA CGGCGACCGC GCCTGCTATG AAGCCATGGT GCTGATGGCG CAGCCGTTCT CTTACCGTTA CCCGCTGGTC GACGGGCAGG GAAACTGGGG CGCGCCGGAT GATCCGAAGT CATTCGCGGC AATGCGTTAT ACCGAATCTC GCCTGTCCAA ATACGCCGAG CTGCTGTTAA GCGAACTCGG CCAGGGGACG GCGGACTGGG TGCCAAACTT CGACGGCACG ATGCAGGAAC CGAAAATGTT ACCGGCGCGT CTGCCGAACA TCCTGCTGAA CGGCACCACC GGTATTGCGG TGGGCATGGC AACAGATATT CCGCCGCATA ACCTGCGCGA AGTCGCGAAA GCGGCGATTA CGCTGATTGA GCAGCCGAAA ACGACGCTGG ATCAGTTGCT GGATATCGTC CAGGGGCCGG ATTACCCGAC CGAAGCGGAG ATCATTACCC CACGTGCGGA AATTCGTAAA ATTTACGAAA ACGGGCGGGG CTCTGTGCGT ATGCGCGCGG TATGGACCAA AGAAGACGGC GCCGTGGTAA TTTCCGCGCT GCCGCATCAG GTGTCTGGCG CGAAAGTGCT GGAGCAGATT GCTGCGCAGA TGCGTAATAA AAAACTGCCG ATGGTGGACG ACCTGCGCGA TGAATCGGAT CACGAAAACC CGACGCGTTT AGTGATTGTC CCGCGCTCCA ACCGTGTGGA TATGGAACAG GTGATGAACC ATCTGTTCGC CACCACCGAT CTGGAAAAAA GCTACCGTAT TAACCTGAAC ATGATCGGTC TGGATGGTCG TCCGGCGGTG AAAAACCTGC TGGAGATCCT CACCGAGTGG CTGGTGTTCC GCCGCGACAC GGTGCGTCGT CGTCTGAACT ATCGTCTGGA GAAAGTGCTT AAGCGCCTGC ATATCCTCGA AGGTCTGCTG GTGGCGTTTC TCAACATCGA CGAAGTGATT GAGATTATCC GTAACGAGGA TGAGCCGAAA CCCGCGCTGA TGTCGCGTTT CGGCATCAGC GAAACCCAGG CGGAAGCGAT TCTCGAACTG AAACTGCGTC ATCTCGCCAA ACTGGAAGAG ATGAAAATTC GCGGTGAGCA GGACGAGCTG GAAAAAGAGC GGGACCAGTT GCAGGGCATT CTCGCGTCCG AACGCAAAAT GAATACCTTG CTGAAAAAAG AGCTACAGGC AGATTCCGAT GCCTATGGCG ACGATCGCCG TTCTCCGCTG CGTGAGCGCG AAGAAGCTAA AGCGATGAGC GAACACGATA TGCTGCCGTC CGAACCGGTG ACTATCGTGC TGTCGCAGAT GGGCTGGGTG CGCAGCGCCA AAGGTCATGA TATTGATGCG CCGGGGCTTA ACTATAAAGC GGGCGACAGC TTTAAAGCCG CGGTGAAAGG TAAGAGCAAT CAACCGGTGG TGTTTATTGA TACCACCGGT CGCAGCTATG CTATTGATCC CATTACGCTT CCGTCGGCGC GCGGGCAGGG CGAACCGCTG ACCGGCAAAC TCACGCTGCC GCCGGGGGCG ACCGTAGAGC ATATGCTGAT GGAAGGCGAT GACCAGAAAC TGCTGATGGC GTCGGATGCG GGCTATGGCT TCGTTTGTAC GTTTAACGAT CTGGTTGCCC GTAACCGTGC CGGTAAAGCG TTGATTACAC TGCCGGAAAA TGCGCACGTC ATGCCGCCGC TGGTGATTGA AGACGAGCAC GATATGCTGC TGGCGATTAC CCAGGCCGGA CGGATGTTGA TGTTCCCGGT TGACTCTCTG CCGCAGCTGT CGAAAGGCAA AGGGAATAAG ATCATTAATA TCCCCTCTGC GGAAGCGGCG AAAGGCGATG ATGGACTGGC GCACCTGTAC GTGCTGCCGC CACAAAGCAC TCTGACTATC CATGTCGGGA AGCGCAAAAT CAAACTGCGC CCTGAAGAGT TACAAAAGGT GGTCGGCGAA CGCGGACGCC GTGGCACATT AATGCGCGGC CTGCAGCGTA TCGATCGCAT TGAGATTGAT TCACCGCATC GCGTAAGTCA TGGCGACAGC GAAGAGTAA
|
Protein sequence | MSDMAERLAL HEFTENAYLN YSMYVIMDRA LPFIGDGLKP VQRRIVYAMS ELGLNASAKF KKSARTVGDV LGKYHPHGDR ACYEAMVLMA QPFSYRYPLV DGQGNWGAPD DPKSFAAMRY TESRLSKYAE LLLSELGQGT ADWVPNFDGT MQEPKMLPAR LPNILLNGTT GIAVGMATDI PPHNLREVAK AAITLIEQPK TTLDQLLDIV QGPDYPTEAE IITPRAEIRK IYENGRGSVR MRAVWTKEDG AVVISALPHQ VSGAKVLEQI AAQMRNKKLP MVDDLRDESD HENPTRLVIV PRSNRVDMEQ VMNHLFATTD LEKSYRINLN MIGLDGRPAV KNLLEILTEW LVFRRDTVRR RLNYRLEKVL KRLHILEGLL VAFLNIDEVI EIIRNEDEPK PALMSRFGIS ETQAEAILEL KLRHLAKLEE MKIRGEQDEL EKERDQLQGI LASERKMNTL LKKELQADSD AYGDDRRSPL REREEAKAMS EHDMLPSEPV TIVLSQMGWV RSAKGHDIDA PGLNYKAGDS FKAAVKGKSN QPVVFIDTTG RSYAIDPITL PSARGQGEPL TGKLTLPPGA TVEHMLMEGD DQKLLMASDA GYGFVCTFND LVARNRAGKA LITLPENAHV MPPLVIEDEH DMLLAITQAG RMLMFPVDSL PQLSKGKGNK IINIPSAEAA KGDDGLAHLY VLPPQSTLTI HVGKRKIKLR PEELQKVVGE RGRRGTLMRG LQRIDRIEID SPHRVSHGDS EE
|
| |