Gene SeSA_A3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3295 
Symbol 
ID6519664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3178720 
End bp3179562 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content49% 
IMG OID642748295 
ProductHpcH/HpaI aldolase/citrate lyase family protein 
Protein accessionYP_002116068 
Protein GI194738068 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.820787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATA TTTCTCATAC ACCGACACGT AGCTGGCTTT TTACCCCAGC AATTCGACCA 
GAACGTTTCA TAAAAGCAGT TGAAAGTGCG GCGGACATTT CTATTATCGA TCTTGAAGAT 
TCCGTCACCC CGAATGACAA GGCGCAGGCC CGGAAAATTG CGATGCAGTT CCTTTCATCC 
CGACCAAACT CATCGCTGAA AATAGCATTA AGAATTAATG GAATGAATAC TCATGCTGGC 
ATTGAAGACC TGCATATGTT ACTGGAATGC CGTTTTTTTC CTGATTACAT TATTCTTCCA 
AAAACAGAGT CAGCCGCGCA CCTGCAAATC GTGGATAGTC TTATCATGAT GGCTGGTTCT 
GATACTCGCC TTATTGGCAT TATTGAGTCA GTTGTCGGGC TTAATGCCGT TGAGTCTATT 
GCGGACGCCA CCCCCAGACT CTGCGGGTTG ATGTTTGGCG CCGCAGATAT GGCGGCTGAC 
ATTGGCGCCA CACCCGCCTG GGAGCCTCTT GCGCTGGCGC GGGCCAGAAT AGTGGCTGCC 
TGCGCTATGA AAGGGCTTCT TGCAATAGAT GCTCCCTTCT TTGATATAGG CGATTTTTCA 
GGTCTGAAAG AGGAAACGCT GCAGGCGCTC AGTTTTGGTT TTTCTGCAAA ATCGGCTATT 
CACCCCGCTC AGATTAGTGT AATCAACACC GCATTTACTC CTACAACGGC AGAAATTAAT 
CATGCTCGTG CAGTACTGAC AGAGAATGCC AAAGGCGTCG GGATCGTTAG CGGCATGATG 
ATAGATGCAG CCGTTGCCCG TCAGGCCCGG AGATTACTCG CCCGGGCAGG GATCTTTTCC 
TGA
 
Protein sequence
MPDISHTPTR SWLFTPAIRP ERFIKAVESA ADISIIDLED SVTPNDKAQA RKIAMQFLSS 
RPNSSLKIAL RINGMNTHAG IEDLHMLLEC RFFPDYIILP KTESAAHLQI VDSLIMMAGS 
DTRLIGIIES VVGLNAVESI ADATPRLCGL MFGAADMAAD IGATPAWEPL ALARARIVAA 
CAMKGLLAID APFFDIGDFS GLKEETLQAL SFGFSAKSAI HPAQISVINT AFTPTTAEIN 
HARAVLTENA KGVGIVSGMM IDAAVARQAR RLLARAGIFS