Gene SeSA_A3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3288 
SymbolnupG 
ID6517668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3171449 
End bp3172705 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content51% 
IMG OID642748288 
Productnucleoside permease NupG 
Protein accessionYP_002116062 
Protein GI194737622 
COG category 
COG ID 
TIGRFAM ID[TIGR00889] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.407193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0115018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTTA AGCTGCAGCT TAAAATACTT TCTTTTCTGC AGTTCTGTCT GTGGGGAAGC 
TGGCTCACTA CCCTGGGCTC GTATATGTTC GTCACCTTAA AATTTGACGG CGCATCTATT 
GGCGCAGTTT ATAGTTCACT GGGGATTGCC GCCGTCTTTA TGCCGACCTT GCTAGGCATT 
GTGGCTGACA AATGGCTGAG CGCGAAATGG GTCTATGCCC TGTGTCATGT CGTCGGCGCC 
ATCACGCTAT TCATGGCCGC GGAAGTCACT ACGCCTGGGG CGATGTTCTT TGTGATCCTG 
CTTAACTCGC TGGCCTATAT GCCGACGTTG GGCTTGATCA ATACAATATC GTATTACCGC 
CTGCAGTCTG CCGGCATGGA TATTGTGACT GACTTCCCGC CTATCCGTAT CTGGGGCACC 
ATTGGCTTTA TTCTGGCGAT GTGGGGCGTG AGTTTCTCCG GTTTCGAGCT GAGCCATATG 
CAGCTTTATA TCGGCGCGAC GCTTTCCGTT CTGCTGGTAC TGTTTACCTT TACCCTGCCG 
CACATTCCGG TGGCGAACCA ACAGAAAAAC CAGAGCTGGA CATCAATGCT GGGCCTTGAC 
GCTTTTGCGC TGTTTAAAAA TAAGCGGATG GCGATTTTCT TCATCTTCTC CATGATGCTG 
GGCGCGGAAC TGCAGATCAC CAACATGTTT GGCAACACCT TCCTGCATAG CTTTGATAAA 
GATCCGCTAT TCGCCAGTAG CTTTATCGTG CAGCACGCCT CGGTGATGAT GTCGATTTCG 
CAGATTTCTG AAACGTTATT CATCCTGACC ATTCCGTTCT TCCTGAGCCG TTATGGTATT 
AAGAACGTTA TGCTTATCAG TATTGTGGCG TGGATGCTGC GTTTCGGCCT GTTCGCTTAT 
GGCGACCCGA CGCCGTTCGG TACCGTTCTG CTGGTACTGT CGATGATTGT GTACGGCTGC 
GCCTTCGATT TCTTCAACAT TTCTGGCTCG GTGTTTGTCG AAAAAGAAGT ACGCCCGGAA 
ATCCGCGCCA GCGCGCAGGG AATGTTCCTG ATGATGACCA ACGGCTTCGG CTGTATCCTG 
GGCGGCATTG TGAGCGGTAA AGTGGTGGAG TATTACACTC AAAACGGCAT TACCGACTGG 
CAGACCGTGT GGCTCATCTT CGCAGGCTAC TCGCTGGTGC TGGCCTTTGC GTTCGTAGCC 
TTGTTCAAAT ACAAACACGT TCGCGTTCCG GCAAGTTCGC AACCCGTTGC ACATTAA
 
Protein sequence
MNLKLQLKIL SFLQFCLWGS WLTTLGSYMF VTLKFDGASI GAVYSSLGIA AVFMPTLLGI 
VADKWLSAKW VYALCHVVGA ITLFMAAEVT TPGAMFFVIL LNSLAYMPTL GLINTISYYR 
LQSAGMDIVT DFPPIRIWGT IGFILAMWGV SFSGFELSHM QLYIGATLSV LLVLFTFTLP 
HIPVANQQKN QSWTSMLGLD AFALFKNKRM AIFFIFSMML GAELQITNMF GNTFLHSFDK 
DPLFASSFIV QHASVMMSIS QISETLFILT IPFFLSRYGI KNVMLISIVA WMLRFGLFAY 
GDPTPFGTVL LVLSMIVYGC AFDFFNISGS VFVEKEVRPE IRASAQGMFL MMTNGFGCIL 
GGIVSGKVVE YYTQNGITDW QTVWLIFAGY SLVLAFAFVA LFKYKHVRVP ASSQPVAH