Gene SeSA_A3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3272 
Symbol 
ID6515314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3159126 
End bp3159812 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content56% 
IMG OID642748272 
Productregulatory protein IclR 
Protein accessionYP_002116046 
Protein GI194735680 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0792755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAC AACCGAATCA AAGCCTGATA GATGGCATTC GCTGTCTGCA ATATCTGGTT 
TCCAGCGACC GTGCTATCGG ATGTCGCGAG CTTGCCCGGC TGATGGATAT TAATACCACG 
CGCGTTAATC GCCTGTTAAT GACGATGGCC TCTATTGGAC TCACGATGCA GGATGAGCAC 
CGACGCTATT TACCCGGGCC AGGCATTCAT GCTTTGGCGG CGCAGGCGAT TCGCGGTTCA 
GCGCTGTTCT CCCATGCGTT GCCTATCCTT GAACGCCATG CGCCCAAAGA CATCGTGGTG 
GCATTAGGCG TGCTATGGGA AGACCAGATT ATCTATATTT ATCACTCTAC GCCGGGTTCG 
CAGGGAAGTC AGGCGTTGGC GGGGTTTCGC ATGTGCCCGG CCTGGCAGTC GGTAACAGGA 
GTGGCGTTAC TGGCGGCAGA AAGCGATGAG GCGCTAATGC AGCGTTTTAC TCCGGAGCAG 
TGGCGTAATC TGGCACCGCA TGTGGCGCAG CAGCGCCAGC GGGGATACGT GCTGTGGCAT 
CACGCTGATG GTGAAGTTTC TATGGCGCAA CCGCTAGACA AGCACGCCGC AGCGCTGGCC 
TTTGCGGGAA TGTGGCGGAT TGATGAGGCG GAGGCGGCTG CGCGTTTACA GGCGTTGAAG 
GCATTAAACC AGCTTATTGC CCAGTAA
 
Protein sequence
MSSQPNQSLI DGIRCLQYLV SSDRAIGCRE LARLMDINTT RVNRLLMTMA SIGLTMQDEH 
RRYLPGPGIH ALAAQAIRGS ALFSHALPIL ERHAPKDIVV ALGVLWEDQI IYIYHSTPGS 
QGSQALAGFR MCPAWQSVTG VALLAAESDE ALMQRFTPEQ WRNLAPHVAQ QRQRGYVLWH 
HADGEVSMAQ PLDKHAAALA FAGMWRIDEA EAAARLQALK ALNQLIAQ