Gene SeSA_A3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3270 
Symbol 
ID6516537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3158100 
End bp3158663 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content52% 
IMG OID642748270 
Producthypothetical protein 
Protein accessionYP_002116044 
Protein GI194735653 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.552102 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0744312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAC AGCATCACTT TCTTATTGCC ATGCCTGCGC TCCAGGACCC GATTTTCCGC 
CGTTCCGTGG TGTATATTTG CGAGCACAAC CAGGACGGCG CTATGGGGAT TATTGTTAAT 
AAGCCTTTGG AAAATCTGCA AATTGAAGGG ATTCTGGAAA AACTAAAAAT TACGCCGGAA 
CCGCGCGATT CGGCAATTCG TCTTGATAAA GCCGTGATGC TCGGCGGCCC GCTGGCGGAA 
GATCGCGGAT TTATTCTCCA TACTCCGCCG TCACGTTTCG CCTCCAGCAT TCGTATCTCA 
GACAATACCG TGATTACCAC CTCCCGCGAT GTGCTGGAAA CGTTAGGTAC CCAACAACAG 
CCTTCCGATG TGCTGGTCGC GCTGGGCTAC GCCTCCTGGG ATAAAGGCCA GCTTGAACAA 
GAGTTGCTTG ATAACGCCTG GCTTACCGCG CCCGCCGATC TCAATATTTT GTTCAAAACG 
CCCATTGCCG AGCGCTGGCG CGAAGCGGCA AAACTTATTG GCATTGATAT TCTGACCATG 
CCTGGCGTTG CGGGGCACGC CTGA
 
Protein sequence
MNLQHHFLIA MPALQDPIFR RSVVYICEHN QDGAMGIIVN KPLENLQIEG ILEKLKITPE 
PRDSAIRLDK AVMLGGPLAE DRGFILHTPP SRFASSIRIS DNTVITTSRD VLETLGTQQQ 
PSDVLVALGY ASWDKGQLEQ ELLDNAWLTA PADLNILFKT PIAERWREAA KLIGIDILTM 
PGVAGHA