Gene SeSA_A3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3253 
Symbol 
ID6515650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3142488 
End bp3143867 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content49% 
IMG OID642748254 
Productpts system mannitol-specific eiicba component 
Protein accessionYP_002116028 
Protein GI194736091 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2213] Phosphotransferase system, mannitol-specific IIBC component 
TIGRFAM ID[TIGR00851] PTS system, mannitol-specific IIC component 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACA AGTCTGCTCG TGCAAAGGTC CAGGCTTTTG GGGGATTTTT GACCGCGATG 
GTCATTCCCA ATATCGGCGC TTTTATTGCC TGGGGTTTTA TCACTGCATT ATTTATTCCA
ACCGGATGGA TGCCAAATGA GCATTTCGCC AAAATTGTCG GCCCGATGAT TACTTATTTA
CTGCCGGTGA TGATTGGTTC TACCGGTGGA CATCTGGTCG GTGGAAAGCG TGGCGCCGTG
ATGGGGGGAA TTGGCACCAT TGGCGTTATC ATCGGTGCTG ATATCCCCAT GTTTCTTGGC
TCAATGATTA TGGGACCTCT CGGCGGTCTG GTCATTAAAT ATATTGATCG GTTGCTGGAA
AAGCGGATTC CCGCCGGTTT TGAGATGGTG ATTAATAACT TCTCGCTGGG TATCGCCGGG
ATGATTTTGT GCCTGCTGGG TTTTGAAGTG ATTGGTCCGG CGGTACTTAT TGCCAATAAC
TTTGTGAAGG AGTGTATTGA ATCATTGGTA CATGCGGGCT ATCTGCCGCT GTTGTCTTTA
ATCAATGAAC CGGCAAAAAT CCTCTTTTTG AACAATGCCA TCGATCAGGG CGTTTATTAT
CCGTTGGGAA TGCAACAGGC GTCGGAAACC GGAAAATCCA TTTTCTTTAT GGTGGCCTCT
AACCCGGGGC CTGGCTTAGG TTTGCTGCTT GCCTTTACGC TATTTGGCAA AGGAATGGCA
AAGAAATCTG CGCCTGGCGC CATGATTATC CATTTCCTCG GGGGGATTCA TGAGCTCTAT
TTCCCCTATG TGCTGATGAA GCCATTAACA CTCATCGCCA TGATTGCCGG CGGGATGAGC
GGAACATGGG TGTTTAACCT GCTGGATGGC GGCCTGGTTG CAGGGCCAAG CCCGGGGTCA
ATTTTCGCTT ACCTGGCGCT GACGCCGAAA GGTTCTTTCC TTGCTACGAT TGCTGGCGTA
ACGGCGGGAA CGGCAGTGAC CTTTATTATC ACCGCTTTCA TTTTGAAAAT GGAAAAAAGT
AGCGAAGCCG ACAGCGAAGA TACTTTTAGT GATTCCGCTA AAGCGGTGAA AGCCATGAAG
CAAGAAGGCA AATTTTCATA TCGCGACGTG AAACGTATCG CCTTTGTCTG CGATGCGGGG
ATGGGCTCCA GCGCAATGGG CGCCACAACG TTCCGCCGAC GTCTGGAAAA GGCGGGCCTG
ACTATCGACG TTAAACATTA CGCTATCGAA AATGTACCGG ATGATGCCGA TATTATCGTT
ACCCACGCCA GCCTTGAAGG ACGTGTTAAG CGAGTCAGCG ATAAGCCCTT AATACTTATT
AAAAACTATA TTGGCGATCC GTGCCTTGAT GATTTATTTA ACCATTTGAC ATCGAATTAA
 
Protein sequence
MEHKSARAKV QAFGGFLTAM VIPNIGAFIA WGFITALFIP TGWMPNEHFA KIVGPMITYL 
LPVMIGSTGG HLVGGKRGAV MGGIGTIGVI IGADIPMFLG SMIMGPLGGL VIKYIDRLLE
KRIPAGFEMV INNFSLGIAG MILCLLGFEV IGPAVLIANN FVKECIESLV HAGYLPLLSL
INEPAKILFL NNAIDQGVYY PLGMQQASET GKSIFFMVAS NPGPGLGLLL AFTLFGKGMA
KKSAPGAMII HFLGGIHELY FPYVLMKPLT LIAMIAGGMS GTWVFNLLDG GLVAGPSPGS
IFAYLALTPK GSFLATIAGV TAGTAVTFII TAFILKMEKS SEADSEDTFS DSAKAVKAMK
QEGKFSYRDV KRIAFVCDAG MGSSAMGATT FRRRLEKAGL TIDVKHYAIE NVPDDADIIV
THASLEGRVK RVSDKPLILI KNYIGDPCLD DLFNHLTSN