Gene SeSA_A3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3240 
Symbol 
ID6517405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3130863 
End bp3131723 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content51% 
IMG OID642748241 
Productmechanosensitive channel MscS 
Protein accessionYP_002116015 
Protein GI194734372 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATT TGAATGTTGT CGACAGCATA AATGGTGCGG GCACCTGGCT GGTACGCAAC 
CAGGCGTTAT TGCTCAGCTA TGCTGTGAAT ATTGTTGCGG CTATCGCTAT TATCATCATC 
GGCTTGATTG TAGCGCGCGT GATCTCCAAT ACGGTAAATC GTCTGATGCG TGCGCGTCAT 
ATTGATGCGA CAGTGGCCGA CTTTCTTTCT GCGCTGGTGC GCTATGGGGT TATCGCTTTT 
ACGCTGATTG CGGCTCTGGG TCGCGTGGGG GTTCAAACCG CCTCGGTTAT TGCCGTACTG 
GGCGCCGCCG GTTTAGCCGT TGGCCTGGCA TTACAGGGAT CGCTCTCTAA CCTTGCGGCT 
GGGGTATTGC TGGTTATGTT CCGTCCGTTC CGCGCCGGTG AGTATGTCGA TTTGGGCGGC 
GTTGCCGGTA CGGTACTGAA CGTGCAAATC TTTTCCACGA CAATGCGCGC GGTAGACGGC 
AAAATTATTG TGATTCCGAA TGGCAAAATT ATCGCGGGAA ATATCATCAA CTATTCTCGT 
GAGCCGGTTC GCCGTAACGA ATTCATTATT GGGGTGGCCT ACGATTCGGA TATCGATCAG 
GTGAAACAGC TGCTAACGAC GATTATCGAG TCCGACGATC GTATTTTAAA AGATCGCGAA 
ATGACGGTAC GTTTGAATGA GCTGGGCGCC TCATCAATTA ATTTTGTGGT GCGTGTCTGG 
AGTAAAAGCA GCGACCTGCA AAATGTCTAC TGGGACGTGC TGGAACGTAT TAAACGTGAA 
TTCGACGCCG CTGGTATTAG CTTCCCGTAC CCGCAGATGG ACGTCAATTT TAAACGTGTG 
AAAGATAACG CCGCGGAGTA A
 
Protein sequence
MEDLNVVDSI NGAGTWLVRN QALLLSYAVN IVAAIAIIII GLIVARVISN TVNRLMRARH 
IDATVADFLS ALVRYGVIAF TLIAALGRVG VQTASVIAVL GAAGLAVGLA LQGSLSNLAA 
GVLLVMFRPF RAGEYVDLGG VAGTVLNVQI FSTTMRAVDG KIIVIPNGKI IAGNIINYSR 
EPVRRNEFII GVAYDSDIDQ VKQLLTTIIE SDDRILKDRE MTVRLNELGA SSINFVVRVW 
SKSSDLQNVY WDVLERIKRE FDAAGISFPY PQMDVNFKRV KDNAAE