| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3197 |
|---|
| Symbol | |
|---|
| ID | 6518034 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3091949 |
|---|
| End bp | 3092692 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642748205 |
|---|
| Product | pili assembly chaperone protein |
|---|
| Protein accession | YP_002115980 |
|---|
| Protein GI | 194735172 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAACA GCAGAAGAAG CCGTGTGATT TTACTCGCGC TGGCGGCAGC ATGGAGCCAG
TGCAGCCCGG CGGCCGTCAA TGTCGACCGG ACCCGTATTA TCATGGATGC GCCGCAGAAA
ACGGTGGCCA TCACGCTGAA TAACGATGAC AAAACCACGC CGTTCCTGGC GCAGTCCTGG
GTGACGGATG CTGACGGGGT GAGAACGGAT GCGCTGATGG CGCTGCCGCC GCTGCAGCGT
ATTGATGCCG GACAGAAATC TCAGGTCCGC ATTACCCAGG TTCGTGGGCT GACAGATAAG
CTCCCTCAGG ACAGGGAAAC ACTGTTCTGG TTTAACGTGC GGGGCGTTCC CCCGAAGCCG
GAAGACGACA ACGTCCTGCA GCTGGCCATG CAGAGTCAGC TGAAACTGTT TTACCGTCCG
AAAGCCATTA TCAGAAGCAG CAGTGACCAG CCGGAAAGAA AGCTGACCGC TGAGCGGAAT
GCGGGACACC TGACCCTCAG AAACCCGACG CCGTACTACA TCACTGTGGC GTGGCTGGGA
GCAGACCGTA GCCACAGGCT CAGCGGTTTC CGCGAGGGCG TGATGGTGCC GCCCCTGGGG
AGCCTGCCTT TAAAGGCTGT TCTGCCAGCA GAAACCCGGA CGCTGTGGGT AGGGTATATT
GATGATTACG GTGGACTGCA GATGAATCGC TACGCCTGCG ATGCCCTGAA CTGCGCGTTT
AAGGACGCAG GGGCGACATC ATGA
|
|---|
| Protein sequence | MKNSRRSRVI LLALAAAWSQ CSPAAVNVDR TRIIMDAPQK TVAITLNNDD KTTPFLAQSW
VTDADGVRTD ALMALPPLQR IDAGQKSQVR ITQVRGLTDK LPQDRETLFW FNVRGVPPKP
EDDNVLQLAM QSQLKLFYRP KAIIRSSSDQ PERKLTAERN AGHLTLRNPT PYYITVAWLG
ADRSHRLSGF REGVMVPPLG SLPLKAVLPA ETRTLWVGYI DDYGGLQMNR YACDALNCAF
KDAGATS
|
|---|
| |