Gene SeSA_A3189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3189 
Symbol 
ID6519475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3085233 
End bp3086096 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content55% 
IMG OID642748198 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002115973 
Protein GI194734263 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTACT CACCTGAAGC GTTAATGGCA TTTGTTGAGA CCGTCTCTTG CGGTTCGTTT 
TCTGCGGCGG CGCGCCGCCT GCGTAAAAGC CAGTCCACCA TTAGTACCGC CATTGCGCAT 
CTGGAGGCGG ATCTGGGATT TTCATTATTT GATCGATCTT CGCGCCAGCC CGTTCTGACC 
GAAGAAGGAA AACGGGTGCT TAGCTATGTT CAGGCTATTT TATCGGCGAG CGATCGTCTG 
GATGAGGTGG CGCTGACATT ATCCGGCGAG ACGGAGGCAA GACTCACGTT CGTCCTCTCT 
GATACCCTGC ACCCTGACAG TCTGGAAGAG TTAATGGCGC AGTTTGATCG TCAATTTCCG 
CATACCGAGT TTGAATGTTT GATCGGAGAA AATGATGATG TCATCGACCT GCTGCAAAAA 
GGGCGCGCCC AGATAGGCCT GATTGAAGCG CGTGATGACT ATCCCACAGA CATTGGCGCG 
ACGCGTCTGC CTGTTCAAAG CTGGATGGGG GTTTATGTGG CGACCACGCA TCCGTTGGCG 
TCGCAGACGA ACCTGCAATG GGAGCAACTG CATACCTGGC GCGAGCTGCG TCTGAATACC 
TACCTTGAAT CTAACGCCAA CATTACGCGC GGCCCGGCCT GGTCAGCGCC AAACTATTTA 
TTGCTGTTGA GCATGGCGGT TCAGGGATTT GGCTGGTGCG TATTGCCCTG CGCGCTGGTG 
GAAGAGTTTG CGGCGGAAAA ACCGCTGGCG CAGCTGGATG TTCCTGGCTG GCCGAGGGCG 
ATTGCTATTG ATTTGCTGTG GAACAAGAAA ACGCCGCCCG GAACGGCGGG GAACTGGCTT 
CGCTACCATT TGCAGCAGAA ATAA
 
Protein sequence
MRYSPEALMA FVETVSCGSF SAAARRLRKS QSTISTAIAH LEADLGFSLF DRSSRQPVLT 
EEGKRVLSYV QAILSASDRL DEVALTLSGE TEARLTFVLS DTLHPDSLEE LMAQFDRQFP 
HTEFECLIGE NDDVIDLLQK GRAQIGLIEA RDDYPTDIGA TRLPVQSWMG VYVATTHPLA 
SQTNLQWEQL HTWRELRLNT YLESNANITR GPAWSAPNYL LLLSMAVQGF GWCVLPCALV 
EEFAAEKPLA QLDVPGWPRA IAIDLLWNKK TPPGTAGNWL RYHLQQK