Gene SeSA_A3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3180 
Symbol 
ID6518379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3075942 
End bp3076961 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content57% 
IMG OID642748189 
ProductHTH-type transcriptional regulator AscG 
Protein accessionYP_002115964 
Protein GI194736198 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAA TGCTGGATGT TTCCCGCCAT GCGGGCGTAT CAAAGGCCAC CGTCTCACGA 
GTGCTGAATG GGACGGGGCA GGTAAAAGAA AGCACGCGCC AGAAAGTGTT TACGGCGATG 
CAGGCTCTGG ACTATCGCCC CAACCTGCTG GCACGCTCGC TGGCGAATCG CACCAGCAAC 
AGCATCGGTC TGGTCGTCTC TACGTTTGAC GGCTTCTATT TTGGCAGTTT GTTGCGCCGG 
GCGTCGCGCC AGGCGGAGTT TCATAACAAG CAGTTGATCG TCACCGATGG TCACGATACG 
CCGGAACGAG AGCAGAAAGC CGTACAAATG TTGGCCGACA GACAGTGCGA CGCTATTATT 
CTTTACACTC GCTATATGGA TGAGCCGGCG ATTTTGTCGT TGATTGACGC CACGGAAATG 
CCGCTGGTGA TTATTAATCG CAACGTCACT CAGGCCCGCG ATCGCGCTAT TTTCTTCGAG 
CAGGAGACGG CGGCATTCCA GGCGGTGGAA TATCTGATTA CGCAGGGCCA TCGCGATATC 
GCCTGTATTA CGCTGCCTGT TCATACTCCC ACCGGCACAT CACGCGTAGC GGGTTATCGC 
AAGGCGCTGG AAAAATATGG CATTCCCTGG CAACCGGCAA AAGTGAAATA CGGCGATTAC 
ACGCTGACGC GCGGCTATGA CGCCTGCCGG GAATTACTGG AGGAAGGCGT CACGTTTAGC 
GCGCTATTCG CCTGTAATGA TGACACGGCG CTGGGCGCGG CAAAAGCGCT GCGCCAGGCC 
GGATTACGCA TCCCGCAGGA TGTGTCGCTG TTTGGTTTTG ACGATGCGCC GGGCGCAACC 
TGGCTTGAAC CGGGGCTTTC AACAGTCTAT TTACCCATCG AGGATATGAT AGCCACCGCA 
ATCGATCAGG CCGTTCGTCT GGCGAACAGC GAGCCGGTCG CCCCGATCCC GCCCTTTACC 
GGCACGCTGA TTCTGCGCGA GTCCGTCGCC GCAGGCCCGT TTTTTCAACG TCCGGCCTAA
 
Protein sequence
MATMLDVSRH AGVSKATVSR VLNGTGQVKE STRQKVFTAM QALDYRPNLL ARSLANRTSN 
SIGLVVSTFD GFYFGSLLRR ASRQAEFHNK QLIVTDGHDT PEREQKAVQM LADRQCDAII 
LYTRYMDEPA ILSLIDATEM PLVIINRNVT QARDRAIFFE QETAAFQAVE YLITQGHRDI 
ACITLPVHTP TGTSRVAGYR KALEKYGIPW QPAKVKYGDY TLTRGYDACR ELLEEGVTFS 
ALFACNDDTA LGAAKALRQA GLRIPQDVSL FGFDDAPGAT WLEPGLSTVY LPIEDMIATA 
IDQAVRLANS EPVAPIPPFT GTLILRESVA AGPFFQRPA