Gene SeSA_A3165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3165 
SymbolthyA 
ID6519370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3062293 
End bp3063087 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content52% 
IMG OID642748176 
Productthymidylate synthase 
Protein accessionYP_002115951 
Protein GI194735179 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.623255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT ATTTAGAACT GATGCAAAAA GTGCTGGATG AAGGCACACA GAAAAACGAC 
CGTACCGGCA CCGGCACGCT TTCCATTTTT GGCCATCAGA TGCGTTTTAA CCTGCAGGAA 
GGCTTTCCGC TGGTGACGAC AAAACGCTGC CATTTACGTT CAATTATTCA CGAACTGCTA 
TGGTTTTTGC AGGGCGATAC CAACATCGCT TACCTGCACG AAAATAATGT CACCATCTGG 
GACGAATGGG CCGATGAGAA CGGCGATTTA GGCCCGGTTT ATGGTAAGCA GTGGCGTGCA 
TGGCCAACAC CGGATGGCCG CCATATCGAT CAGATCGCCA CGGTCTTAAG CCAGCTTAAA 
AACGACCCGG ACTCTCGTCG TATTATCGTT TCTGCGTGGA ACGTCGGCGA GCTGGATAAG 
ATGGCGCTGG CGCCGTGTCA CGCCTTTTTC CAGTTTTATG TCGCAGATGG AAAACTCTCC 
TGTCAGCTTT ATCAGCGCTC CTGCGATGTG TTCCTCGGTC TGCCGTTCAA CATTGCCAGC 
TACGCGTTAC TGGTGCATAT GATGGCGCAA CAGTGCGACC TGGACGTCGG CGATTTTGTC 
TGGACCGGCG GCGACACGCA CCTGTACAGC AACCATATGG AGCAGACGCA CCTGCAATTA 
AGCCGTGAAC CGCGCGCGCT GCCGAAGTTG GTCATTAAGC GTAAACCTGA TTCGCTTTTT 
GACTACCGGT TCGATGATTT CGAAATTGAA GGCTATGATC CGCACCCCGG TATTAAAGCG 
CCGGTCGCTA TCTAA
 
Protein sequence
MKQYLELMQK VLDEGTQKND RTGTGTLSIF GHQMRFNLQE GFPLVTTKRC HLRSIIHELL 
WFLQGDTNIA YLHENNVTIW DEWADENGDL GPVYGKQWRA WPTPDGRHID QIATVLSQLK 
NDPDSRRIIV SAWNVGELDK MALAPCHAFF QFYVADGKLS CQLYQRSCDV FLGLPFNIAS 
YALLVHMMAQ QCDLDVGDFV WTGGDTHLYS NHMEQTHLQL SREPRALPKL VIKRKPDSLF 
DYRFDDFEIE GYDPHPGIKA PVAI