Gene SeSA_A3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3149 
SymbolrarD 
ID6519209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3042153 
End bp3043067 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content42% 
IMG OID642748162 
ProductRarD protein 
Protein accessionYP_002115939 
Protein GI194736270 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID[TIGR00688] rarD protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAAAT ATCTGCGTAG CGGTACCATG TTTGTGGTAC TGGCATTTAT ATTATGGGGG 
TTAACACCTT TATATTATCA ATATTTATCA GGGGGAAATC TCGCACAAAT ATTGATATAC 
CGGGTGTTCT GGTCAATTCC ATTATTACTG GCAGTAAGAT TGTTATTTCG GCAGCGAACG 
CGATTTCATG ATGCCTGGAA AGATAAAAAA TCTTTTTTCT TCTGCATGAT CGCCGGACTT 
TTAATGATTG TCTCATGGTC ATCTTTTATT TATGCGCTAA CCCATCATCT GGTGCTTGAT 
GCCAGCCTCG GCTATTTTAT CAACCCGCTA TTTGTTATTG CGCTGGGATG CATTTTTCTT 
AAAGAAAAAC TGTCGTTGTT TCAGGCCATC GCCGTTTTTT CCGGTGTTTG TGGCCTGACT 
TTTCAAATTA TCATGCTACG GCATTTCCCG GCGCTGGCGC TAACCATGGG ATTATCATTT 
GCGCTATATG GCCTGGCACG AAAGTTTATA CATTATGATG TGATGACATC GATAACGATT 
GAAACATTAT GGGCATTGCC TGTCTCACTA TTAATTTTTA TCTTTAGCGA TAGCGGGCCA 
ATTATATCCG CTAATACTCC TTTCTTTTTG TATGTTATGA CGGCGCCAGT GACAATCATT 
CCACTGGTAT TATTTGCCAT CGCGTTAAAT CATACCTCGT TGATTGTCAC CGGACTGGCG 
CAATATATAG AGCCGTCTTT ACAGTTCTTA CTTGCCATTA TGATATTTGG CGAGCACATT 
AATTACGCGG AACTGCTCTG CTTTTGTGCA GTATGGTTCG GGTTGTTTCT ATGCATATCT 
GAAAATTTAT ATTCCCATTA TCTCCGCGCC CGTCTGAAAC CGGTGTTCGG CAGGGTACAG 
CGCTTCTTTC GCTAA
 
Protein sequence
MEKYLRSGTM FVVLAFILWG LTPLYYQYLS GGNLAQILIY RVFWSIPLLL AVRLLFRQRT 
RFHDAWKDKK SFFFCMIAGL LMIVSWSSFI YALTHHLVLD ASLGYFINPL FVIALGCIFL 
KEKLSLFQAI AVFSGVCGLT FQIIMLRHFP ALALTMGLSF ALYGLARKFI HYDVMTSITI 
ETLWALPVSL LIFIFSDSGP IISANTPFFL YVMTAPVTII PLVLFAIALN HTSLIVTGLA 
QYIEPSLQFL LAIMIFGEHI NYAELLCFCA VWFGLFLCIS ENLYSHYLRA RLKPVFGRVQ 
RFFR