Gene SeSA_A3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3138 
SymbolfucI 
ID6516167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3032496 
End bp3034271 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content58% 
IMG OID642748152 
ProductL-fucose isomerase 
Protein accessionYP_002115929 
Protein GI194735482 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2407] L-fucose isomerase and related proteins 
TIGRFAM ID[TIGR01089] L-fucose isomerase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.653551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCAGCTTACC GAAAATCGGT ATCCGCCCGG TGATTGATGG ACGTCGTATG 
GGCGTACGCG AGTCGCTCGA AGAGCAAACC ATGAACATGG CGAAAGCGAC GGCGGCGCTC
ATCACCGAGA AAATCCGCCA CGCCTGCGGG GCACAGGTGG AGTGCGTCAT TGCAGATACC
TGTATTGCCG GAATGGCGGA ATCCGCCGCC TGTGAAGAAA AATTCAGTAG CCAGAACGTG
GGCGTGACCA TTACCGTTAC GCCGTGTTGG TGCTATGGCA GCGAAACCAT TGATATGGAC
CCGATGCGTC CGAAAGCCAT CTGGGGCTTT AACGGCACAG AGCGTCCCGG GGCGGTTTAC
CTTGCCGCGG CGCTGGCGGC GCACAGCCAG AAAGGCATTC CGGCGTTCTC CATTTATGGC
CATGACGTGC AGGATGCCGA CGATACCTCC ATTCCCGCCG ACGTCGAAGA AAAACTGCTG
CGTTTTGCGC GGGCAGGGTT AGCGGTAGCC AGCATGAAAG GCAAAAGCTA CCTCTCCGTC
GGCGGCGTGT CGATGGGGAT CGCGGGTTCC ATTGTCGATC ATAACTTCTT TGAATCCTGG
CTGGGCATGA AGGTGCAAGC GGTAGATATG ACCGAACTGC GCCGCCGTAT CGATCAAAAA
ATTTATGATG AAGCCGAACT GGAGATGGCG CTGGCGTGGG CGGATAAAAA CTTCCGCTAC
GGCGAAGATC AGAATGCCTC GCAGTATAAG CGCAATGAAG CCCAGAACCG CGCGGTGCTA
AAAGAGAGCC TGCTGATGGC GATGTGTATT CGCGATATGA TGCAGGGCAA CAAGACGCTG
GCGGACAAAG GGTTAGTTGA AGAATCGCTG GGCTACAACG CCATTGCCGC CGGCTTCCAG
GGCCAGCGCC ACTGGACCGA TCAATACCCG AACGGCGATA CCGCCGAAGC GCTGCTCAAT
AGTTCTTTTG ACTGGAACGG CATACGCGAA CCGTTTGTCG TCGCCACCGA AAATGACAGT
CTGAACGGCG TAGCGATGCT GTTTGGCCAT CAACTCACCG GTACCGCGCA GATCTTCGCC
GACGTGCGAA CCTACTGGTC GCCGGAAGCC GTAGAACGCG TCACCGGCCA GGCGCTTAGC
GGACTGGCGG AGCATGGCAT TATTCACCTG ATTAACTCCG GTTCTGCCGC TCTGGACGGT
GCCTGTAAAC AGCGCGACAG CGAAGGCAAG CCGACTATGA AACCGCACTG GGAAATCAGC
CAACAAGAGG CGGATGCGTG TCTGGCGGCC ACCGAATGGT GCCCGGCGAT TCACGAATAC
TTCCGCGGCG GCGGCTACTC ATCCCGTTTC CTGACCGAAG GCGGCGTGCC ATTCACCATG
ACCCGCGTGA ATATCATCAA AGGCCTGGGG CCAGTACTGC AAATCGCCGA GGGCTGGAGC
GTCGAACTGC CGAAAGCGAT GCACGATCAG CTCGATGCCC GCACCAACTC TACCTGGCCT
ACCACCTGGT TTGCGCCGCG TCTTACCGGC AAAGGCCCGT TTACCGATGT CTATTCGGTG
ATGGCGAACT GGGGCGCTAA CCACGGCGTA CTCACCATCG GCCATGTAGG GGCGGACTTT
ATTACTCTCG CCGCGATGCT GCGTATCCCG GTATGTATGC ACAACGTGGA GGAGGCGAAG
ATCTACCGTC CTTCCGCCTG GGCGGCTCAC GGTATGGATA TCGAAGGCCA GGATTATCGT
GCCTGCCAGA ATTATGGCCC GCTGTATAAA CGTTAA
 
Protein sequence
MKKISLPKIG IRPVIDGRRM GVRESLEEQT MNMAKATAAL ITEKIRHACG AQVECVIADT 
CIAGMAESAA CEEKFSSQNV GVTITVTPCW CYGSETIDMD PMRPKAIWGF NGTERPGAVY
LAAALAAHSQ KGIPAFSIYG HDVQDADDTS IPADVEEKLL RFARAGLAVA SMKGKSYLSV
GGVSMGIAGS IVDHNFFESW LGMKVQAVDM TELRRRIDQK IYDEAELEMA LAWADKNFRY
GEDQNASQYK RNEAQNRAVL KESLLMAMCI RDMMQGNKTL ADKGLVEESL GYNAIAAGFQ
GQRHWTDQYP NGDTAEALLN SSFDWNGIRE PFVVATENDS LNGVAMLFGH QLTGTAQIFA
DVRTYWSPEA VERVTGQALS GLAEHGIIHL INSGSAALDG ACKQRDSEGK PTMKPHWEIS
QQEADACLAA TEWCPAIHEY FRGGGYSSRF LTEGGVPFTM TRVNIIKGLG PVLQIAEGWS
VELPKAMHDQ LDARTNSTWP TTWFAPRLTG KGPFTDVYSV MANWGANHGV LTIGHVGADF
ITLAAMLRIP VCMHNVEEAK IYRPSAWAAH GMDIEGQDYR ACQNYGPLYK R