Gene SeSA_A3137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3137 
SymbolfucP 
ID6515664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3031148 
End bp3032464 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content50% 
IMG OID642748151 
ProductL-fucose transporter 
Protein accessionYP_002115928 
Protein GI194734794 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID[TIGR00885] L-fucose:H+ symporter permease 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.436667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAACA CAACAATACA AACGCAGAGT TTTCGTGCTG TGGATGCAGA GCAAAGCAAG 
AGCAAGCGCT ACATTATTCC ATTCGCCTTA CTTTGCTCGC TATTTTTTCT GTGGGCTGTC
GCCAATAATC TGAATGACAT TTTACTACCG CAGTTTCAAC AAGCTTTTAC GCTAACTAAC
TTTCAGGCTG GGCTTATTCA GTCAGCCTTT TATTTCGGTT ATTTCGTCAT TCCAATCCCC
GCTGGGATTT TGATGAAAAA ACTCAGTTAT AAAGCAGGGA TTATCACCGG GCTTTTTTTG
TATGCTGTTG GCGCCGCATT ATTCTGGCCT GCCGCCGAGA TAATGAATTA CACATTATTT
TTAATTGGCC TGTTTATCAT CGCCGCCGGT TTAGGCTGTC TTGAAACTGC AGCCAACCCT
TTTGTTACGG TATTAGGTCC AGAAAGCGGC GGACATTTCC GGCTTAATCT GGCGCAAACT
TTTAACTCCT TTGGCGCTAT TATCGCCGTT GTGTTTGGGC AAAGCCTTAT TTTGTCTAAC
GTGCCGCATC AATCGCAAGA AGCGCTTGAT AAAATGACGC CGGATCAGCT TAGCGCCTAT
AAACACAGCC TGGTGTTATC GGTACAAACG CCATACATGA TTATCGTCGC CATCGTATTA
GTAGTTGCGC TGCTGATTAT GCTGACCAAA TTTCCGGCCC TGCAAAGTGA CGATCATAGC
GATGCTAAAC AAAGCTCTTT CTTATCTTCT CTCTCCCGAC TCATCCGTAT CCGCCACTGG
CGCTGGGCGG TGCTGGCGCA GTTCTGCTAC GTGGGGGCGC AAACCGCCTG CTGGAGCTAT
CTGATCCGCT ACGCCATTGA GGAGATCCCT GGAATGACGC CCGGTTTCGC CGCCAACTAC
CTGACCGGCA CGATGGTGTG CTTCTTTATC GGCCGTTTCA CCGGGACCTG GCTTATCAGC
CGCTTCGCGC CGCATAAAGT GCTGGCCGCC TACGCCCTGT TTGCCATGCT CCTGTGTCTG
ATTTCCGCCT TTAGCGGCGG ACATATCGGC CTGCTGGCGC TGACGTTGTG TAGCGCATTT
ATGTCAATCC AGTACCCAAC CATCTTCTCG CTGGGTATCA AAAATCTGGG ACAGGACACT
AAGTACGGCT CGTCTTTTAT CGTCATGACC ATTATTGGCG GCGGTATTGT CACGCCAGTA
ATGGGCTTCG TTAGCGACGC CGCAGGCAAA ATCCCGACCG CCGAACTGGT TCCGGCATTG
TGCTTTGCCG TCATCTTCAT TTTTGCCCGT TTCCGTTCAC AAGCGGCGAC AAACTGA
 
Protein sequence
MGNTTIQTQS FRAVDAEQSK SKRYIIPFAL LCSLFFLWAV ANNLNDILLP QFQQAFTLTN 
FQAGLIQSAF YFGYFVIPIP AGILMKKLSY KAGIITGLFL YAVGAALFWP AAEIMNYTLF
LIGLFIIAAG LGCLETAANP FVTVLGPESG GHFRLNLAQT FNSFGAIIAV VFGQSLILSN
VPHQSQEALD KMTPDQLSAY KHSLVLSVQT PYMIIVAIVL VVALLIMLTK FPALQSDDHS
DAKQSSFLSS LSRLIRIRHW RWAVLAQFCY VGAQTACWSY LIRYAIEEIP GMTPGFAANY
LTGTMVCFFI GRFTGTWLIS RFAPHKVLAA YALFAMLLCL ISAFSGGHIG LLALTLCSAF
MSIQYPTIFS LGIKNLGQDT KYGSSFIVMT IIGGGIVTPV MGFVSDAAGK IPTAELVPAL
CFAVIFIFAR FRSQAATN